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The map label for this gene is yahF [H]

Identifier: 218688193

GI number: 218688193

Start: 364115

End: 365425

Strand: Direct

Name: yahF [H]

Synonym: ECED1_0350

Alternate gene names: 218688193

Gene position: 364115-365425 (Clockwise)

Preceding gene: 218688189

Following gene: 218688194

Centisome position: 6.99

GC content: 55.91

Gene sequence:

>1311_bases
TTGCTGGCGGAGATTGAAGAACTGTTCAACACCAAAGCGCAAAGCGGCTCGCACGAGGCGCGTTACGCCACTATTGCCAG
CGCCAAAAAGTATATCCCGGAAAGTAACCTGGCAGTGATTTCGGTCAACGGTCTGTTTGCCGCTCGCGAAGCGCGTCAGG
CGCTGCAAAATGACCTCAACGTGATGCTGTTTTCCGATAATGTCTCAGTTGAAGATGAACTGGCGCTCAAACAGTTGGCC
CATGAAAAAGGGCTGCTGATGATGGGGCCAGACTGCGGCACGGCGATTATCAACGGCGCGGCGCTCTGCTTTGGTAACGC
CGTGCGTCGCGGCAACATCGGTATTGTTGGCGCATCTGGCACCGGCAGCCAGGAATTGAGCGTCCGTATCCATGAATTTG
GTGGCGGCGTTTCACAACTGATCGGCACCGGCGGGCGCGACCTGAGCGAGAAAATCGGTGGCCTGATGATGCTCGATGCC
ATCGGGATGCTGGAAAACGATCCGCAAACTGAAATCATTGTGCTTATCTCCAAACCGCCTGCGCCTGCGGTGGCTCGCAA
AGTGCTGGAACGCGCACGCGCCTGCCGCAAGCCAGTGGTGGCCTGCTTCCTCGGTCGTGGCGAAACGTCAGTGGATGAGC
AGGGGCTACAGTTTGCTCGCGGCAGCAAAGAGGCGGCATTGAAAGCGGTGATGCTCTCCGGCGTGAAACAAGAACATCTC
GACCTGCATACGCTTAACCAGCCGTTGATTGCGGATGTGCGGGCGCGTCTGCAACCGCAGCAGAAATACATTCGTGGTCT
GTTCTGCGGCGGTACGCTGTGTGACGAAACCCTGTTCGCGGTGATGGAAAAACATGGCGATGTCTACAGCAATATCCAGC
CCGATCCTGAATTCCGCCTGCAAGATATCAACCGCAGCATCAAACACACCTTCCTCGATTTTGGCGATGATGACTTCACC
AACGGCAAGCCGCATCCAATGATTGACCCGACCAACCGTATCAGCCGCTTGATCGAAGAAGCGCGCGATCCAGAAGTGGC
GGTGATCGTGATGGATTTTGTGCTCGGATTTGGATCGCATGAAGATCCGGTCGGTTCCACCATCGAGGCGATCAAAGAAG
CGAAAGCGATCGCCGCTGCCGAAGGACGCGAGTTGATCATTCTCGCCTATGTGCTGGGCACCGATCTCGATACGCCATCA
TTAGAACAACAAAGCCAGATGCTGCTTGATGCCGGAGTGATTCTGGCGAGCAGCAGCACCAATACCGGATTGCTGGCGCG
TGAATTTATCTGCAAAGGGGAGGAAGCCTGA

Upstream 100 bases:

>100_bases
TCTGACGTTTCAATTGTTACGGCTGTAATCTTGTTATCACCGTTAATAACAACATCTTGATCCAGAGTCGTCTTCTCTGT
ATTCAGCGTAACCGGATCAG

Downstream 100 bases:

>100_bases
TGAGCCAGTCACTGTTTAGCCAACCGTTGAACGTTATTAACGTCGGTATCGCCATGTTTAGCGATGATCTGAAAAAGCAG
CATGTAGAAGTGACCCAACT

Product: putative enzyme with acyl-CoA domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLA
HEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDA
IGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHL
DLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFT
NGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPS
LEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA

Sequences:

>Translated_436_residues
MLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLA
HEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDA
IGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHL
DLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFT
NGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPS
LEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>Mature_436_residues
MLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLA
HEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDA
IGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHL
DLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFT
NGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPS
LEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA

Specific function: Unknown

COG id: COG0074

COG function: function code C; Succinyl-CoA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli fdrA and some, to bacterial sucD [H]

Homologues:

Organism=Escherichia coli, GI1786513, Length=436, Percent_Identity=97.0183486238532, Blast_Score=845, Evalue=0.0,
Organism=Escherichia coli, GI1786729, Length=433, Percent_Identity=40.6466512702078, Blast_Score=279, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR005811
- InterPro:   IPR016102 [H]

Pfam domain/function: PF02629 CoA_binding; PF00549 Ligase_CoA [H]

EC number: NA

Molecular weight: Translated: 46993; Mature: 46993

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCE
VMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASG
EEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHCCCEECCCEEEEECCC
TGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPP
CCCCEEEEEEEHHCCCHHHHHCCCCCCHHHHHCCEEEHHHHHHCCCCCCCEEEEEEECCC
APAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHL
CHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHC
DLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRL
HHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHH
QDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC
EDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSST
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCC
NTGLLAREFICKGEEA
CCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCE
VMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASG
EEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHCCCEECCCEEEEECCC
TGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPP
CCCCEEEEEEEHHCCCHHHHHCCCCCCHHHHHCCEEEHHHHHHCCCCCCCEEEEEEECCC
APAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHL
CHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHC
DLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRL
HHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHH
QDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCC
EDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSST
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCC
NTGLLAREFICKGEEA
CCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]