Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218688107
Identifier: 218688107
GI number: 218688107
Start: 268449
End: 269003
Strand: Direct
Name: 218688107
Synonym: ECED1_0246
Alternate gene names: NA
Gene position: 268449-269003 (Clockwise)
Preceding gene: 218688106
Following gene: 218688108
Centisome position: 5.15
GC content: 40.72
Gene sequence:
>555_bases ATGTCCATCAAAATAAGGAAAAGTATAAGTATGAGAGCGATTTTCAAATGTTATTCTCTAATGATTTTATTTGCAGTATC AGGCTGTTCAATGGCGAGAAATAGCGGTGATTACACTGCTGTGGATATTAACGGGATAAATCATACGGATAAGGCTATAA ATTATATACACATCAATGGTTACGGCGGACCAAATATTGGTCCATTCGGGGACGGTGGAGGATATTGTTGCGTTATGCTG CCAGATAAGTGGCATTCTGGATTAAAAGCCCGAGTTGAGTGGGAGGTTGATCCAAATACAGCTCCTCTGCCTCCAGGCTA TAAGGACAGGGAGAAATTTGAAGCATGGAAGAAAGTTGCGCTAAACAGTTTTAGAAAATATTCAACAATTGTTGATATCC CGGAATATGATGCTGAGCTTTGTGGCCTGACCGTTCATTTTCTATCGTGCAATCAGATAAAAGTGACAACCGTCTGCCAG AAATATGGCACACCAAATTATCCTATCAAAGAACCCCGCGAGATGAAGGAACCAGCAACATGTCCAGCAAAATAA
Upstream 100 bases:
>100_bases TTCTGCCATGCAATCAGATAAAAGTGACAACAGTCTGCCAAGGGTATGGTACACCAAATTATCCCATCAAAGAACCCCGC GAGATGAAGGAACCAGCAAC
Downstream 100 bases:
>100_bases GAAATGGAATGAATATAACAAAAGTAGTTAAAGGCTGTCTGGTATTAATTTTGATGGTGATTTCGGGTTGCTCAGCAGCT AATTACGACGATTATACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSIKIRKSISMRAIFKCYSLMILFAVSGCSMARNSGDYTAVDINGINHTDKAINYIHINGYGGPNIGPFGDGGGYCCVML PDKWHSGLKARVEWEVDPNTAPLPPGYKDREKFEAWKKVALNSFRKYSTIVDIPEYDAELCGLTVHFLSCNQIKVTTVCQ KYGTPNYPIKEPREMKEPATCPAK
Sequences:
>Translated_184_residues MSIKIRKSISMRAIFKCYSLMILFAVSGCSMARNSGDYTAVDINGINHTDKAINYIHINGYGGPNIGPFGDGGGYCCVML PDKWHSGLKARVEWEVDPNTAPLPPGYKDREKFEAWKKVALNSFRKYSTIVDIPEYDAELCGLTVHFLSCNQIKVTTVCQ KYGTPNYPIKEPREMKEPATCPAK >Mature_183_residues SIKIRKSISMRAIFKCYSLMILFAVSGCSMARNSGDYTAVDINGINHTDKAINYIHINGYGGPNIGPFGDGGGYCCVMLP DKWHSGLKARVEWEVDPNTAPLPPGYKDREKFEAWKKVALNSFRKYSTIVDIPEYDAELCGLTVHFLSCNQIKVTTVCQK YGTPNYPIKEPREMKEPATCPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20538; Mature: 20407
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIRKSISMRAIFKCYSLMILFAVSGCSMARNSGDYTAVDINGINHTDKAINYIHING CCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCEEEEEEEEC YGGPNIGPFGDGGGYCCVMLPDKWHSGLKARVEWEVDPNTAPLPPGYKDREKFEAWKKVA CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH LNSFRKYSTIVDIPEYDAELCGLTVHFLSCNQIKVTTVCQKYGTPNYPIKEPREMKEPAT HHHHHHHHEEEECCCCCHHHHCEEEEEEECCCEEEEEHHHHCCCCCCCCCCCHHHCCCCC CPAK CCCC >Mature Secondary Structure SIKIRKSISMRAIFKCYSLMILFAVSGCSMARNSGDYTAVDINGINHTDKAINYIHING CEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCEEEEEEEEC YGGPNIGPFGDGGGYCCVMLPDKWHSGLKARVEWEVDPNTAPLPPGYKDREKFEAWKKVA CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH LNSFRKYSTIVDIPEYDAELCGLTVHFLSCNQIKVTTVCQKYGTPNYPIKEPREMKEPAT HHHHHHHHEEEECCCCCHHHHCEEEEEEECCCEEEEEHHHHCCCCCCCCCCCHHHCCCCC CPAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA