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The map label for this gene is yhjK [H]

Identifier: 218550803

GI number: 218550803

Start: 3594621

End: 3596570

Strand: Reverse

Name: yhjK [H]

Synonym: EFER_3514

Alternate gene names: 218550803

Gene position: 3596570-3594621 (Counterclockwise)

Preceding gene: 218550804

Following gene: 218550802

Centisome position: 78.38

GC content: 51.33

Gene sequence:

>1950_bases
ATGGCAGTGGTTGCGGCCGTTGTCCTGGTGTTTGTCTTTGTTTTTTGCACCGTTTTGCTGTTCCACCTGGTCCAGCAGAA
TCGCTATAACACGGCTACGCAACTGGAAAGCATTGCTCGCTCTGTCCGCGAACCTTTATCCTCCGCCATTCTCAAGGGTG
ATATTCCCCAGGCGGAGGCCATTCTCTCAAGTATCAAACCTGCTGGCGTGGTCAGTCGCGCTGATGTGGTGCTGCCTAAT
CAGTTTCAGGCGCTGCGTAAGAGCTTTATCCCTGAACGCCCGGTGCCGGTAATGGTCACTCGCCTGTTTGAGCTACCGGT
ACAAATCTCGCTGGGCGTTTACTCGCTGGAACGCCCGGCTAACCCGCAGCCGATTGCTTATCTGGTATTACAGGCGGACT
CCTTCCGCATGTACAAGTTTGTGATGAGCACCTTATCTACGTTAGTGACCATTTACTTACTTTTGTCGCTTATCCTGACC
GTCGCCATCAGCTGGTGCATTAATCGACTGATTTTACATCCTTTACGTAATATCGCGCGTGAACTTAACGCCATTCCGCC
ACAGGAACTGATTGGTCACCAGTTGGCGTTACCACGGCTTCACCATGACGATGAAATCGGTTTACTGGTACGCAGTTACA
ACCTTAATCAGCAACTTATGCAACGCCATTATGAAGAGCAAAGCGAAAACGCGCTGCGCTTCCCGGTGTCTGATTTGCCA
AACAAAGCGTTGCTAATGGAAATGCTGGAACAGGTGGTAGCGCGTAAACAAACCACCGCACTGATGATTATCACTTGTGA
AACGCTACGTGATACTGCGGGTGTGCTGAAAGAAGCGCAACGGGAAATCCTGCTACTCACGCTGGTGGAGAAGTTGAAGT
CAGTGTTGTCGCCACGCATGGTACTGGCGCAAATCAGCGGTTATGACTTTGCGGTGATCGCCAACGGTGTACAGGAGCCA
TGGCATGCTATTACTTTAGGTCAGCAAGTACTTACTATCATGAATGAACGCCTGCCGATTGAATCTATCCAACTGCGCCC
CAGCGGCAGCATCGGTGTGGCGATGTTCCATGGTGATTTAAGCGCTGAGCAACTGTATGGTCATGCGGTTTCGGCAGCAT
TTACCGCAATGCGTAAGGGCAAAAACCAAATTCAGTTCTTTGAACCAGAACAGATGGAAGCCGCCCAGCAACGGCTGACC
GAAGAGAGCGATATTCTCAATGCTCTTGAAAATCATCGGTTTGCTCTCTGGTTACAACCGCAGGTTGATATGACCAGCGG
TAAGGTGCTGAGCGCCGAAGTTTTATTGCGGATGCAACAGCCAGATGGAAGCTGGGAATTGCCTGATGGCCTTATTGAGC
GCATTGAATCTTGTGGGCTAATGGTCACTGTGGGCCAGTGGGTGCTGGAGGAGTCTTGTCGCTTGCTTTCTGCCTGGCAG
GAACGCGGGATAAATATGCCGCTATCGGTGAATCTTTCTGCTCTGCAATTAATGCACCCGAATATGGTGCCAGAGCTGCT
TGGGTTACTGAGCCGCTACCGTGTACAACCGGGCATGTTAATTCTGGAAGTGACAGAAAGCCGCCGTATTGACGACCCAC
ATGCTGCTGTAGCTATCCTGCGTCCGTTACGTAACGCCGGAGTGCGTATTGCGCTGGATGATTTTGGTATGGGCTACGCC
GGGCTTCGTCAGTTACAGCATATGAAATCACTACCTGTCGATGTCCTGAAAATCGACAAGATGTTTGTTGAAGGCTTACC
TGATGATGACAGCATGATCCGCGCCATCATTATGCTGGCGCAAAGCCTGGGCCTGGAAATGATTGCTGAAGGTGTGGAGA
CAGAAGCGCAACGCGACTGGCTGGCGAAGGCGGGAGTGGGTATCGCTCAGGGCTTCCTGTTTGCGCGAGCTGTGCCAATA
GATTTGTTCGCTGAACGTTACCTGGACTAA

Upstream 100 bases:

>100_bases
CCTCTCTTAATGCCGCTACGATCAGGTATACTCGGGCGGCAGTCTGGGATTTCCGGAGGGAGACAATTTGCGCGTTAGTC
GTTCGTTAACAATCAAGCAG

Downstream 100 bases:

>100_bases
TTACAAAACTTTAAAAAGGTCTGGCTTATGCGAGCCAGATCAAATTTTTTAACATTCTTGTTTCAAGTATGATCCAGGTA
CATTTCTGATATGTTGTGTT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MAVVAAVVLVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPQAEAILSSIKPAGVVSRADVVLPN
QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILT
VAISWCINRLILHPLRNIARELNAIPPQELIGHQLALPRLHHDDEIGLLVRSYNLNQQLMQRHYEEQSENALRFPVSDLP
NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMVLAQISGYDFAVIANGVQEP
WHAITLGQQVLTIMNERLPIESIQLRPSGSIGVAMFHGDLSAEQLYGHAVSAAFTAMRKGKNQIQFFEPEQMEAAQQRLT
EESDILNALENHRFALWLQPQVDMTSGKVLSAEVLLRMQQPDGSWELPDGLIERIESCGLMVTVGQWVLEESCRLLSAWQ
ERGINMPLSVNLSALQLMHPNMVPELLGLLSRYRVQPGMLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDVLKIDKMFVEGLPDDDSMIRAIIMLAQSLGLEMIAEGVETEAQRDWLAKAGVGIAQGFLFARAVPI
DLFAERYLD

Sequences:

>Translated_649_residues
MAVVAAVVLVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPQAEAILSSIKPAGVVSRADVVLPN
QFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILT
VAISWCINRLILHPLRNIARELNAIPPQELIGHQLALPRLHHDDEIGLLVRSYNLNQQLMQRHYEEQSENALRFPVSDLP
NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMVLAQISGYDFAVIANGVQEP
WHAITLGQQVLTIMNERLPIESIQLRPSGSIGVAMFHGDLSAEQLYGHAVSAAFTAMRKGKNQIQFFEPEQMEAAQQRLT
EESDILNALENHRFALWLQPQVDMTSGKVLSAEVLLRMQQPDGSWELPDGLIERIESCGLMVTVGQWVLEESCRLLSAWQ
ERGINMPLSVNLSALQLMHPNMVPELLGLLSRYRVQPGMLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDVLKIDKMFVEGLPDDDSMIRAIIMLAQSLGLEMIAEGVETEAQRDWLAKAGVGIAQGFLFARAVPI
DLFAERYLD
>Mature_648_residues
AVVAAVVLVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPQAEAILSSIKPAGVVSRADVVLPNQ
FQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTV
AISWCINRLILHPLRNIARELNAIPPQELIGHQLALPRLHHDDEIGLLVRSYNLNQQLMQRHYEEQSENALRFPVSDLPN
KALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMVLAQISGYDFAVIANGVQEPW
HAITLGQQVLTIMNERLPIESIQLRPSGSIGVAMFHGDLSAEQLYGHAVSAAFTAMRKGKNQIQFFEPEQMEAAQQRLTE
ESDILNALENHRFALWLQPQVDMTSGKVLSAEVLLRMQQPDGSWELPDGLIERIESCGLMVTVGQWVLEESCRLLSAWQE
RGINMPLSVNLSALQLMHPNMVPELLGLLSRYRVQPGMLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAG
LRQLQHMKSLPVDVLKIDKMFVEGLPDDDSMIRAIIMLAQSLGLEMIAEGVETEAQRDWLAKAGVGIAQGFLFARAVPID
LFAERYLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=636, Percent_Identity=90.5660377358491, Blast_Score=1191, Evalue=0.0,
Organism=Escherichia coli, GI1787541, Length=431, Percent_Identity=31.322505800464, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI87081921, Length=432, Percent_Identity=29.1666666666667, Blast_Score=175, Evalue=7e-45,
Organism=Escherichia coli, GI1790496, Length=253, Percent_Identity=37.1541501976285, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI87081743, Length=246, Percent_Identity=36.5853658536585, Blast_Score=149, Evalue=7e-37,
Organism=Escherichia coli, GI1786507, Length=245, Percent_Identity=34.2857142857143, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI87081845, Length=251, Percent_Identity=31.8725099601594, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI87081980, Length=260, Percent_Identity=31.9230769230769, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1788849, Length=273, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082096, Length=444, Percent_Identity=27.7027027027027, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788502, Length=255, Percent_Identity=29.4117647058824, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787055, Length=282, Percent_Identity=25.531914893617, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787410, Length=154, Percent_Identity=32.4675324675325, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 72613; Mature: 72482

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVAAVVLVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPQAEA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILSSIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECEEEECCCC
NPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNAIPPQELIGHQLALPRLHHDDEIGLLVRSYNLNQQLMQRHYEEQSENALRFPVSDLP
HHCCCCHHHHHCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEECCHHHCC
NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM
CHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLAQISGYDFAVIANGVQEPWHAITLGQQVLTIMNERLPIESIQLRPSGSIGVAMFHGDL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCC
SAEQLYGHAVSAAFTAMRKGKNQIQFFEPEQMEAAQQRLTEESDILNALENHRFALWLQP
CHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEECC
QVDMTSGKVLSAEVLLRMQQPDGSWELPDGLIERIESCGLMVTVGQWVLEESCRLLSAWQ
CCCCCCCCEEEHHHHHEECCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGINMPLSVNLSALQLMHPNMVPELLGLLSRYRVQPGMLILEVTESRRIDDPHAAVAIL
HCCCCCCEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVEGLPDDDSMIRAIIMLA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QSLGLEMIAEGVETEAQRDWLAKAGVGIAQGFLFARAVPIDLFAERYLD
HHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
AVVAAVVLVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPQAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILSSIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECEEEECCCC
NPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNAIPPQELIGHQLALPRLHHDDEIGLLVRSYNLNQQLMQRHYEEQSENALRFPVSDLP
HHCCCCHHHHHCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEECCHHHCC
NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM
CHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLAQISGYDFAVIANGVQEPWHAITLGQQVLTIMNERLPIESIQLRPSGSIGVAMFHGDL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCC
SAEQLYGHAVSAAFTAMRKGKNQIQFFEPEQMEAAQQRLTEESDILNALENHRFALWLQP
CHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEECC
QVDMTSGKVLSAEVLLRMQQPDGSWELPDGLIERIESCGLMVTVGQWVLEESCRLLSAWQ
CCCCCCCCEEEHHHHHEECCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGINMPLSVNLSALQLMHPNMVPELLGLLSRYRVQPGMLILEVTESRRIDDPHAAVAIL
HCCCCCCEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVEGLPDDDSMIRAIIMLA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QSLGLEMIAEGVETEAQRDWLAKAGVGIAQGFLFARAVPIDLFAERYLD
HHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]