Click here to switch to the map view.

The map label for this gene is glgC [H]

Identifier: 218550696

GI number: 218550696

Start: 3473613

End: 3474908

Strand: Reverse

Name: glgC [H]

Synonym: EFER_3407

Alternate gene names: 218550696

Gene position: 3474908-3473613 (Counterclockwise)

Preceding gene: 218550697

Following gene: 218550695

Centisome position: 75.73

GC content: 49.07

Gene sequence:

>1296_bases
ATGGTTGGGCTAGAAAAAAATGATCCGCTGATGTTGGCACGCCAGCTGCCCATCAAATCTGTTGCGCTCATTCTCGCAGG
GGGTCGTGGAACCCGTCTGAAAGATTTAACTAATAAGCGAGCAAAGCCTGCCGTCCACTTTGGTGGAAAGTTTCGTATTA
TCGATTTTGCACTCTCTAACTGTATTAACTCCGGTATTCGCCGTATCGGCGTGATTACGCAATACCAGTCACATACGTTG
GTGCAGCATATTCAACGCGGTTGGTCATTCTTCAATGAAGAGATGAATGAGTTCGTCGATTTGCTGCCTGCTCAGCAAAG
AATGAAAGGCGAAAACTGGTATCGCGGAACGGCAGATGCGGTTACGCAGAACCTGGATATTATTCGTCGTTACAAAGCTG
AGTACGTGGTAATCCTCGCCGGGGATCATATCTACAAGCAAGACTACTCGCGTATGCTGATCGACCACGTCGAAAAAGGT
GCACGTTGCACCGTAGCTTGTATGCCAGTGCCTATTCAGGAAGCAAGTGCATTTGGTGTAATGGCTGTTGACCAGGACGA
AAAAATTATTGAGTTCGTGGAAAAACCAGCAAATCCACCTTCAATGCCAAATGATCCAACTCGTTCGCTGGCCAGTATGG
GGATTTACGTCTTTGACGCGGATTACCTGTATGAACTGTTGGAAGAAGACGATAACGACGAAAACTCCAGCCATGATTTC
GGTAAAGATATTATTCCGAAGATCACCCAGGCTGGCATGGCTTATGCACATCCATTCCCGCTCTCTTGCGTACAGTCCGA
TCCTGATTCTGAACCGTACTGGCGCGATGTAGGTACGCTCGAAGCTTACTGGAAAGCGAACTTAGACCTGGCATCTGTTG
TGCCAGAACTGGATATGTATGACCAGCACTGGCCGATTCGTACTTATAACGAATCTCTGCCTCCGGCGAAGTTTGTTCAG
GACCGTTCAGGCAGCCATGGTATGACGCTTAACTCGCTGGTTTCCGGCGGCTGCGTGATCTCCGGTTCAGTCGTAGTGCA
ATCCGTTCTCTTCTCCAGAGTCCGTGTAAATTCATTCTGTAATATCGATTCGGCAGTATTGCTGCCGGAAGTATGGGTAG
GACGTTCTTGTCGTTTACGTCGCTGCGTCATTGACCGTGCCTGTGTCATTCCGGAAGGGATGGTGATTGGGGAGAATGCG
GAGGAAGATGCACGTCGTTTCTACCGTTCAGAGGAAGGCATCGTGCTGGTAACCCGTGAGATGCTGCGGAAGTTAGGGCA
TAAACAGGAGCGATAA

Upstream 100 bases:

>100_bases
TCCTTTCGCCGGAGAGGATAATCCGGTCGTTTTGGAAGTCTGGCATGGGTCTGCGCACGGGCTGTGCGTGTTTCAAAAGT
CATAGAAAAAGGAGTTAATT

Downstream 100 bases:

>100_bases
TGCAGGTTTTACACGTTTGTTCTGAGATGTTCCCGTTGCTAAAAACGGGCGGTCTGGCGGATGTCATCGGTGCGTTGCCT
GCAGTGCAAATCGAGGATGG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVGLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTL
VQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
ARCTVACMPVPIQEASAFGVMAVDQDEKIIEFVEKPANPPSMPNDPTRSLASMGIYVFDADYLYELLEEDDNDENSSHDF
GKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMYDQHWPIRTYNESLPPAKFVQ
DRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENA
EEDARRFYRSEEGIVLVTREMLRKLGHKQER

Sequences:

>Translated_431_residues
MVGLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTL
VQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
ARCTVACMPVPIQEASAFGVMAVDQDEKIIEFVEKPANPPSMPNDPTRSLASMGIYVFDADYLYELLEEDDNDENSSHDF
GKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMYDQHWPIRTYNESLPPAKFVQ
DRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENA
EEDARRFYRSEEGIVLVTREMLRKLGHKQER
>Mature_431_residues
MVGLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTL
VQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
ARCTVACMPVPIQEASAFGVMAVDQDEKIIEFVEKPANPPSMPNDPTRSLASMGIYVFDADYLYELLEEDDNDENSSHDF
GKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMYDQHWPIRTYNESLPPAKFVQ
DRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENA
EEDARRFYRSEEGIVLVTREMLRKLGHKQER

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=431, Percent_Identity=96.0556844547564, Blast_Score=871, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 48651; Mature: 48651

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSN
CCCCCCCCCEEEEHHCCHHEEEEEEECCCCCCHHHHHCCCCCCCEEECCEEEEHHHHHHH
CINSGIRRIGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHH
VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIQEASAFGV
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCEE
MAVDQDEKIIEFVEKPANPPSMPNDPTRSLASMGIYVFDADYLYELLEEDDNDENSSHDF
EEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCCCCC
GKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMY
CHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHCCCCHHHHCCCCCCC
DQHWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFC
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHC
NIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCCEEEEHHH
MLRKLGHKQER
HHHHHCCCCCC
>Mature Secondary Structure
MVGLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSN
CCCCCCCCCEEEEHHCCHHEEEEEEECCCCCCHHHHHCCCCCCCEEECCEEEEHHHHHHH
CINSGIRRIGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHH
VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIQEASAFGV
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCEE
MAVDQDEKIIEFVEKPANPPSMPNDPTRSLASMGIYVFDADYLYELLEEDDNDENSSHDF
EEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCCCCC
GKDIIPKITQAGMAYAHPFPLSCVQSDPDSEPYWRDVGTLEAYWKANLDLASVVPELDMY
CHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHCCCCHHHHCCCCCCC
DQHWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFC
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHC
NIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCCEEEEHHH
MLRKLGHKQER
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA