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The map label for this gene is sfmH [H]

Identifier: 218550687

GI number: 218550687

Start: 3462034

End: 3463185

Strand: Reverse

Name: sfmH [H]

Synonym: EFER_3398

Alternate gene names: 218550687

Gene position: 3463185-3462034 (Counterclockwise)

Preceding gene: 218550688

Following gene: 218550686

Centisome position: 75.47

GC content: 40.36

Gene sequence:

>1152_bases
ATGGATAACTTTGGAGGCATGATGCTTACTTATTCTTGTGGACATATAAAAGAAATTATTTTATTGTTTGTTCTATCGAT
CTGTAGTTGCTATAACATCGTATATGCTGAAGATATGGGACGGGATCGCGCTTTTTGTTATCCTGGTGCGCCAGGTAATA
ATACTACTCCTGCGATGTTTTCTTATAATTTTGGCACTATCACTATCTCAGATGTTAATAATAACTCACCCGGAAAAGTA
CTACCCTCACAGAACTGGAAAATAGGAACTTACAAGGCTTACTGTAATTCATTGGATGATTATGAAGTTTATTTTTCTGG
TGTGTCTGGGATTGATCCGTCGGGGGCGTCAGGTGATTATCAGGGGAGCGATATATTTATTCCTGTAACTCATGAAATAT
CTGTCTCGACACATGTAAAACTCTATAATAAAAATGGCTCACTGACAGATAAGACAGTACCTTTTGACAATTATAGCACT
AATTATCCATTGGATAGAAGTAAACCATCGAGTTGGGGGTCAGGTACTGAAGGTTATATAAAAATTAGACTTGATAAAAA
AATAATATCCGATATATCAATAAATAATGTATTGCTGGTTTCTTTGTATGTCAGTCAGCTCCCAACAGAGCATGGACCAA
TTCCAGTATTTAATGCTTATATTGGCAACTTAAATATTGAGGTTCCACAAGGCTGCACAATTAATGAGGGTACAAGTTTT
ACCGTTAATATGCCAGATGTTTGGGCCAGTGAATTAAGTCGGGCGGGGGCTGGAGTGAAGCCAACGGGTGTTTCTCCGGT
AGCAACGACTATTCCGATAAATTGTACGAATAAAGATGTTGATGCCGTAATGACGCTAGTTTTTGATGGCAATATTTCAT
CAACGAGAGACATTAATGGTCGGCAAAGTATTATTCAGGCGGAGGATAACCCAGACGTTGGAATTATGATTATGGATAGC
CAACAGGAATCCGTAGACTTGAATGCACTGGCTGCCCATGTTGGTGTGCCATTTAAATTAGTTGAAAACAGGGCAGAGTC
AGCTCAGACGGCAGACGTGACTTTTCTGTCTCTCCCCGTCAGCACCACTGGGCGACTACCTGCTGCGGGCCATTATAACG
CTCTGGCTGTTTTGAGGGTGGAATACCAGTGA

Upstream 100 bases:

>100_bases
ATTAGCTGGCAAACATTGGATCTTTATAATAATGCCTTACCTGAATGGAACGTAAAGTTAAATGTTTTTCAAAATAATGC
AATGGGTGCAGTAGCAATAC

Downstream 100 bases:

>100_bases
TATGTGATAGTCGGTACAAAATAAAACCATTAGATATATGGTAATCAGGTTACCAGCCTGGGTTAACTGCTAAAACTTTA
CTGTTACAGGTGTATTGTGC

Product: fimbrial adhesin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDNFGGMMLTYSCGHIKEIILLFVLSICSCYNIVYAEDMGRDRAFCYPGAPGNNTTPAMFSYNFGTITISDVNNNSPGKV
LPSQNWKIGTYKAYCNSLDDYEVYFSGVSGIDPSGASGDYQGSDIFIPVTHEISVSTHVKLYNKNGSLTDKTVPFDNYST
NYPLDRSKPSSWGSGTEGYIKIRLDKKIISDISINNVLLVSLYVSQLPTEHGPIPVFNAYIGNLNIEVPQGCTINEGTSF
TVNMPDVWASELSRAGAGVKPTGVSPVATTIPINCTNKDVDAVMTLVFDGNISSTRDINGRQSIIQAEDNPDVGIMIMDS
QQESVDLNALAAHVGVPFKLVENRAESAQTADVTFLSLPVSTTGRLPAAGHYNALAVLRVEYQ

Sequences:

>Translated_383_residues
MDNFGGMMLTYSCGHIKEIILLFVLSICSCYNIVYAEDMGRDRAFCYPGAPGNNTTPAMFSYNFGTITISDVNNNSPGKV
LPSQNWKIGTYKAYCNSLDDYEVYFSGVSGIDPSGASGDYQGSDIFIPVTHEISVSTHVKLYNKNGSLTDKTVPFDNYST
NYPLDRSKPSSWGSGTEGYIKIRLDKKIISDISINNVLLVSLYVSQLPTEHGPIPVFNAYIGNLNIEVPQGCTINEGTSF
TVNMPDVWASELSRAGAGVKPTGVSPVATTIPINCTNKDVDAVMTLVFDGNISSTRDINGRQSIIQAEDNPDVGIMIMDS
QQESVDLNALAAHVGVPFKLVENRAESAQTADVTFLSLPVSTTGRLPAAGHYNALAVLRVEYQ
>Mature_383_residues
MDNFGGMMLTYSCGHIKEIILLFVLSICSCYNIVYAEDMGRDRAFCYPGAPGNNTTPAMFSYNFGTITISDVNNNSPGKV
LPSQNWKIGTYKAYCNSLDDYEVYFSGVSGIDPSGASGDYQGSDIFIPVTHEISVSTHVKLYNKNGSLTDKTVPFDNYST
NYPLDRSKPSSWGSGTEGYIKIRLDKKIISDISINNVLLVSLYVSQLPTEHGPIPVFNAYIGNLNIEVPQGCTINEGTSF
TVNMPDVWASELSRAGAGVKPTGVSPVATTIPINCTNKDVDAVMTLVFDGNISSTRDINGRQSIIQAEDNPDVGIMIMDS
QQESVDLNALAAHVGVPFKLVENRAESAQTADVTFLSLPVSTTGRLPAAGHYNALAVLRVEYQ

Specific function: Involved in regulation of length and mediation of adhesion of sfmA fimbriae (but not necessary for the production of fimbriae). Seems to be mannose binding adhesin [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693100, Length=207, Percent_Identity=29.4685990338164, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41456; Mature: 41456

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFGGMMLTYSCGHIKEIILLFVLSICSCYNIVYAEDMGRDRAFCYPGAPGNNTTPAMF
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCCCEEE
SYNFGTITISDVNNNSPGKVLPSQNWKIGTYKAYCNSLDDYEVYFSGVSGIDPSGASGDY
EECCCEEEEEECCCCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
QGSDIFIPVTHEISVSTHVKLYNKNGSLTDKTVPFDNYSTNYPLDRSKPSSWGSGTEGYI
CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KIRLDKKIISDISINNVLLVSLYVSQLPTEHGPIPVFNAYIGNLNIEVPQGCTINEGTSF
EEEECHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCEEEEEECCEEEECCCCCEECCCCEE
TVNMPDVWASELSRAGAGVKPTGVSPVATTIPINCTNKDVDAVMTLVFDGNISSTRDING
EEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
RQSIIQAEDNPDVGIMIMDSQQESVDLNALAAHVGVPFKLVENRAESAQTADVTFLSLPV
CCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECC
STTGRLPAAGHYNALAVLRVEYQ
CCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDNFGGMMLTYSCGHIKEIILLFVLSICSCYNIVYAEDMGRDRAFCYPGAPGNNTTPAMF
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCCCEEE
SYNFGTITISDVNNNSPGKVLPSQNWKIGTYKAYCNSLDDYEVYFSGVSGIDPSGASGDY
EECCCEEEEEECCCCCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
QGSDIFIPVTHEISVSTHVKLYNKNGSLTDKTVPFDNYSTNYPLDRSKPSSWGSGTEGYI
CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
KIRLDKKIISDISINNVLLVSLYVSQLPTEHGPIPVFNAYIGNLNIEVPQGCTINEGTSF
EEEECHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCEEEEEECCEEEECCCCCEECCCCEE
TVNMPDVWASELSRAGAGVKPTGVSPVATTIPINCTNKDVDAVMTLVFDGNISSTRDING
EEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
RQSIIQAEDNPDVGIMIMDSQQESVDLNALAAHVGVPFKLVENRAESAQTADVTFLSLPV
CCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECC
STTGRLPAAGHYNALAVLRVEYQ
CCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]