Click here to switch to the map view.

The map label for this gene is yhdN [H]

Identifier: 218550569

GI number: 218550569

Start: 3355233

End: 3355601

Strand: Reverse

Name: yhdN [H]

Synonym: EFER_3277

Alternate gene names: 218550569

Gene position: 3355601-3355233 (Counterclockwise)

Preceding gene: 218550570

Following gene: 218550568

Centisome position: 73.13

GC content: 45.53

Gene sequence:

>369_bases
ATGTGGTTACTTGACCAGTGGGCAGAGCGTCATATTACTGAGGCACAATCCAAAGGTGAGTTTGATAACCTACCTGGTAG
CGGCGAACCATTAATCCTGGATGATGATTCCCACGTGCCACCAGAATTACGTGCGGGGTATCGCTTGTTGAAGAATGCTG
GTTGCTTACCGCCAGAACTTGAGCAACGGAGGGAAGCAATTCATCTTATGGATATCCTCGAAGGTATCCGTCACGATGAT
CCGCAATATCAAGAGATTAGTCGTCGATTGTCATTACTGGAGTTAAAGCTGCGACAAGCAGGATTGAGTACCGATTTTTT
ACGCGGCGATTATGCTGACAAGTTGTTGAATAAAATCAACGATAACTAG

Upstream 100 bases:

>100_bases
GCAACGTAAAAAAACCCGCCCCGGCGGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTT
GTTCATCCCCTGGAGTATTT

Downstream 100 bases:

>100_bases
TGGAGTATGTATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAGC
AGCAGATGATGGAGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIHLMDILEGIRHDD
PQYQEISRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Sequences:

>Translated_122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIHLMDILEGIRHDD
PQYQEISRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN
>Mature_122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIHLMDILEGIRHDD
PQYQEISRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=122, Percent_Identity=93.4426229508197, Blast_Score=234, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 14058; Mature: 14058

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIHLMDILEGIRHDDPQYQEISRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC
>Mature Secondary Structure
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIHLMDILEGIRHDDPQYQEISRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]