Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is 218550110
Identifier: 218550110
GI number: 218550110
Start: 2863953
End: 2864858
Strand: Direct
Name: 218550110
Synonym: EFER_2796
Alternate gene names: NA
Gene position: 2863953-2864858 (Clockwise)
Preceding gene: 218550109
Following gene: 218550111
Centisome position: 62.41
GC content: 42.72
Gene sequence:
>906_bases ATGCTCCCACACCTCGATGTTAACGATCACCGTTATGTCCCATCACTCGATCAGCTTCGCAAACAGGCTCGCTTCCTCAG AGATCACTGCAATGTTCAATTGAACCATGCCTATGAAATGGTCGCGTATTTTTATCGATTTTCTAGCTGGGGAGATCTGC TAAATCACACCACCAGTGATATAGCCATCGTGGATCAGCAGATCGTTGCTCAGATGCGAGAAAAACTCCAGACATACAGA AACCGTCTGCCAGCATCTGATCTGCAACGATTATCCCAATTAGCAGCGCTGAAGGGCACCTTAACAGAGGCTGTGGTGAA TGACCGTATAAAGACATTAAACGATCTGGATATCGTTCAGATCTATAATTGCCTGTATAACGAAGAATACTGGGGTGAAC TAGTTCCGGTTTCTTGGTATGAAGTCCTCGATGAAACAGACAGATGTTTAATGTTGCTCGCCAAACGGACTGTTCTAGCG GGGCGTACCAAAACAGTTAACCCTCATATTAGCTTTCCATGGTTTGGATTCAGAATGTATGGATATTTACATATTGATGG AAACACACTGAACTACAAATGCAGAGAACTGGACAGCTACCTATTTCCATCAGAAAAAAAATACACAACAGTATTCAGCA GGCCGTGGTTTGCTGCATATGTCAGCGGTTTCATCCGTATGCAGCTTCATTCACTATGCAGTTCTGGCTTCTCAGGGAAA ATCTCCTTTGAGAGAATAAATAATGTCGATTTGGTTGCAGGACCAGTAAGACAACCATACTTTGATGATGAAATACCAAG TTCATCAATGGACACAATTGTTGAAAATTTACTCAGCATGGGAGGCGTGAGGGATACCAGAAAACAAAATATAGCATTCC GTTTTGGTAACGGTGAGATGTATTGA
Upstream 100 bases:
>100_bases AATCCGCCAAAGCGCTTTTTACCCTTTAGTTTTCAGAGCATATCCTTTTAACTTTGCTCTGTGTTTACAGGCCGCAGAGT ATTTGTAAAAGGAATATGCA
Downstream 100 bases:
>100_bases TGGACCGCTCATTCTGGATTTTACTCAGTGAACTGCCATCTTCAACAACTGCATTTATTTTACTTGCAGGTGTCATCTAT ACGCTGGCCAGAAAAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLPHLDVNDHRYVPSLDQLRKQARFLRDHCNVQLNHAYEMVAYFYRFSSWGDLLNHTTSDIAIVDQQIVAQMREKLQTYR NRLPASDLQRLSQLAALKGTLTEAVVNDRIKTLNDLDIVQIYNCLYNEEYWGELVPVSWYEVLDETDRCLMLLAKRTVLA GRTKTVNPHISFPWFGFRMYGYLHIDGNTLNYKCRELDSYLFPSEKKYTTVFSRPWFAAYVSGFIRMQLHSLCSSGFSGK ISFERINNVDLVAGPVRQPYFDDEIPSSSMDTIVENLLSMGGVRDTRKQNIAFRFGNGEMY
Sequences:
>Translated_301_residues MLPHLDVNDHRYVPSLDQLRKQARFLRDHCNVQLNHAYEMVAYFYRFSSWGDLLNHTTSDIAIVDQQIVAQMREKLQTYR NRLPASDLQRLSQLAALKGTLTEAVVNDRIKTLNDLDIVQIYNCLYNEEYWGELVPVSWYEVLDETDRCLMLLAKRTVLA GRTKTVNPHISFPWFGFRMYGYLHIDGNTLNYKCRELDSYLFPSEKKYTTVFSRPWFAAYVSGFIRMQLHSLCSSGFSGK ISFERINNVDLVAGPVRQPYFDDEIPSSSMDTIVENLLSMGGVRDTRKQNIAFRFGNGEMY >Mature_301_residues MLPHLDVNDHRYVPSLDQLRKQARFLRDHCNVQLNHAYEMVAYFYRFSSWGDLLNHTTSDIAIVDQQIVAQMREKLQTYR NRLPASDLQRLSQLAALKGTLTEAVVNDRIKTLNDLDIVQIYNCLYNEEYWGELVPVSWYEVLDETDRCLMLLAKRTVLA GRTKTVNPHISFPWFGFRMYGYLHIDGNTLNYKCRELDSYLFPSEKKYTTVFSRPWFAAYVSGFIRMQLHSLCSSGFSGK ISFERINNVDLVAGPVRQPYFDDEIPSSSMDTIVENLLSMGGVRDTRKQNIAFRFGNGEMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35021; Mature: 35021
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPHLDVNDHRYVPSLDQLRKQARFLRDHCNVQLNHAYEMVAYFYRFSSWGDLLNHTTSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCH IAIVDQQIVAQMREKLQTYRNRLPASDLQRLSQLAALKGTLTEAVVNDRIKTLNDLDIVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IYNCLYNEEYWGELVPVSWYEVLDETDRCLMLLAKRTVLAGRTKTVNPHISFPWFGFRMY HHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEE GYLHIDGNTLNYKCRELDSYLFPSEKKYTTVFSRPWFAAYVSGFIRMQLHSLCSSGFSGK EEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCE ISFERINNVDLVAGPVRQPYFDDEIPSSSMDTIVENLLSMGGVRDTRKQNIAFRFGNGEM EEHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC Y C >Mature Secondary Structure MLPHLDVNDHRYVPSLDQLRKQARFLRDHCNVQLNHAYEMVAYFYRFSSWGDLLNHTTSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCH IAIVDQQIVAQMREKLQTYRNRLPASDLQRLSQLAALKGTLTEAVVNDRIKTLNDLDIVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IYNCLYNEEYWGELVPVSWYEVLDETDRCLMLLAKRTVLAGRTKTVNPHISFPWFGFRMY HHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEE GYLHIDGNTLNYKCRELDSYLFPSEKKYTTVFSRPWFAAYVSGFIRMQLHSLCSSGFSGK EEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCE ISFERINNVDLVAGPVRQPYFDDEIPSSSMDTIVENLLSMGGVRDTRKQNIAFRFGNGEM EEHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA