Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is yajO [H]
Identifier: 218549921
GI number: 218549921
Start: 2677252
End: 2678226
Strand: Direct
Name: yajO [H]
Synonym: EFER_2606
Alternate gene names: 218549921
Gene position: 2677252-2678226 (Clockwise)
Preceding gene: 218549920
Following gene: 218549928
Centisome position: 58.34
GC content: 53.54
Gene sequence:
>975_bases ATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCATTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCGGA TCGCGGTAATCACGCATGGACACTGCCAGAAGAGAGCAGCCGTCCCATCATTAAACGCGCGCTGGAAGGCGGCATAAATT TCTTTGATACCGCCAATAGTTATTCTGACGGCAGCAGCGAAGAGATCGTCGGTCGTGCACTGCGGGACTTTGCCCGTCGT GAAGACGTGGTCGTTGCAACTAAAGTGTTCCATCGCGTTGGTGATTTGCCGGAAGGATTATCCCGTGCGCAAATTTTGCG CTCAATTGACGACAGCCTACGACGTCTCGGCATGGATTATGTCGATATCCTGCAAATTCATCGCTGGGATTACAACACGC CGATCGAAGAGACGCTGGAAGCCCTGAACGACGTGGTAAAAGCAGGGAAAGCGCGTTATATCGGCGCGTCATCCATGCAC GCCTCGCAGTTTGCTCAGGCGCTGGAACTGCAAAAACAGCACGGCTGGGCGCAGTTTGTCAGTATGCAGGATCACTACAA TCTGATTTATCGCGAAGAAGAACGAGAGATGCTGCCGCTGTGTTATCAGGAAGGCGTGGCGGTGATTCCGTGGAGTCCGC TGGCGCGGGGACGTCTGACGCGTCCCTGGGGAGAAACCACCGCGCGGCTGGTGTCGGATGAAGTGGGGAAAAATCTCTAC CAAGAAAGCGATGAAAATGACGCGCAGATCGCAGAACGGTTAACAGGCGTCAGTGAAGAACTGGGGGCAACGCGAGCACA AGTCGCGCTGGCATGGTTGTTGAGCAAACCTGGCATTGCAGCACCAATTATCGGTACATCGCGGGAAGAACAACTTGATG AATTGCTGAACGCGGTGGATATCACCTTGAAGCCGGAACAGATTGCTGAACTGGAAACGCCGTATAAACCGCATCCGGTC GTAGGATTTAAATAG
Upstream 100 bases:
>100_bases GTGAAGCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAACGAATGCAGCCGCAGCACATGCAACTTGAAGTATGACG AGTATGGCAGGAGTGGCAGC
Downstream 100 bases:
>100_bases GAATCCAGGCCTGATGAGACGTGACAAGCGTCACATCAGGCGTAGGTGCACAGCTACGACAGAATACCCAGCGGCCAGTG ATGACCAATAAAGTACAGGA
Product: aldoketo-oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQYNPLGKTDLRISRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARR EDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY QESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPV VGFK
Sequences:
>Translated_324_residues MQYNPLGKTDLRISRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARR EDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY QESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPV VGFK >Mature_324_residues MQYNPLGKTDLRISRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARR EDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY QESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPV VGFK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=313, Percent_Identity=32.9073482428115, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI27436962, Length=316, Percent_Identity=32.9113924050633, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=33.033033033033, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI27436969, Length=315, Percent_Identity=32.0634920634921, Blast_Score=151, Evalue=8e-37, Organism=Homo sapiens, GI27436966, Length=313, Percent_Identity=32.5878594249201, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI4504825, Length=313, Percent_Identity=31.9488817891374, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI223718702, Length=280, Percent_Identity=27.8571428571429, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI41152114, Length=283, Percent_Identity=27.5618374558304, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI41327764, Length=273, Percent_Identity=28.2051282051282, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI223718708, Length=139, Percent_Identity=33.8129496402878, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=99.3827160493827, Blast_Score=667, Evalue=0.0, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=35.4545454545455, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1788070, Length=324, Percent_Identity=33.9506172839506, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=27.8735632183908, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788081, Length=301, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1787674, Length=328, Percent_Identity=27.7439024390244, Blast_Score=96, Evalue=2e-21, Organism=Caenorhabditis elegans, GI212645785, Length=313, Percent_Identity=27.7955271565495, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17566692, Length=304, Percent_Identity=23.0263157894737, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=334, Percent_Identity=39.2215568862275, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=31.2121212121212, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6319958, Length=295, Percent_Identity=30.5084745762712, Blast_Score=135, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6319951, Length=315, Percent_Identity=28.2539682539683, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6322615, Length=246, Percent_Identity=31.3008130081301, Blast_Score=119, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6321052, Length=155, Percent_Identity=31.6129032258064, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=345, Percent_Identity=27.536231884058, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI45549126, Length=345, Percent_Identity=27.536231884058, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24646155, Length=318, Percent_Identity=30.8176100628931, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24646159, Length=311, Percent_Identity=29.903536977492, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36435; Mature: 36435
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYNPLGKTDLRISRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC YSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDY CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH VDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFV HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHH SMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY HHHHHHHHEEECCHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVD HCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC ITLKPEQIAELETPYKPHPVVGFK CCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQYNPLGKTDLRISRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC YSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDY CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH VDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFV HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHH SMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY HHHHHHHHEEECCHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVD HCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC ITLKPEQIAELETPYKPHPVVGFK CCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]