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The map label for this gene is ybaE [H]

Identifier: 218549887

GI number: 218549887

Start: 2638195

End: 2639895

Strand: Direct

Name: ybaE [H]

Synonym: EFER_2572

Alternate gene names: 218549887

Gene position: 2638195-2639895 (Clockwise)

Preceding gene: 218549880

Following gene: 218549888

Centisome position: 57.49

GC content: 52.91

Gene sequence:

>1701_bases
ATGCGACTGCTCAACCGTCTTAACCAGTATCAACGTCTGTGGCAACCTTCCGCCGGAAAGCCGCAAACCGTCACCGTCAG
CGAACTGGCCGAACGCTGTTTTTGCAGCGAACGCCATGTTCGTACGCTGTTACGCCAGGCACAGGAGGCGGGATGGCTGG
AGTGGCAGGCGCAGTCAGGACGCGGAAAGCGCGGTCAACTACGCTTTCTGGTCACGCCAGAATCGCTACGCTATGCGATG
ATGGAACAAGCACTGGAAACCGGAAAGCAGCAAGATGTGCTGGAACTGGCGCAACTGGCCCCAGGTGAGCTGCGCACTCT
GTTACAGCCGTTTATGGGCGGACAATGGCAAAACGACACGCCAACGTTGCGTATTCCTTACTATCGCCCGCTCGAACCGT
TACAACCGGGCTTTTTGCCCGGCCGTGCCGAGCAGCATCTCGCCGGGCAAATATTTTCCGGCCTGACCCGCTTCGATAAT
CATACCCAGCGCCCGATTGGCGATTTAGCGCATCACTGGGAAACCTCTGCTGACGGGTTACGCTGGGACTTTTATCTTCG
CTCAACCCTACACTGGCATAACGGCGATGCAGTAAAAGCCACACACTTACACCAGCGGTTATTGATGCTGTTACAGCTGT
CAGCACTGCATCAATTATTTATTAGCGTGAAGCGTATTGAAGTCACCCATCCGCAGTGTCTGATCTTCTTTTTACATCGC
CCCGATTACTGGCTTGCACACCGACTGGCGAGCTATTGCAGCCATCTGGCGCATCCGCAATTACCCCTGGTAGGAACCGG
ACCTTTCCGCTTAACACAATTCACACCGGAACTGGTGCGACTCGAAAGCCATGATTATTACCATTTACGTCATCCGCTGC
TTAAAGCGGTTGAGTACTGGATAACCCCACCGCTTTTTGAAAAAGATTTGGGTACCAGTTGTCGGCATCCCGTGCAAATC
ACCATCGGCAAACCGGAGGAGTTGCAACGGGTCAGTCAGGTCAGTAGCGGCATCAGTTTAGGTTTTTGCTATTTAACGTT
GCGCAAAAGTCCCCGACTGTCCCTCTGGCAGGCGCGAAAAGTGATCTCCATTATTCATCAATCCGGTTTATTACAAACGT
TAGAAGTCGGAGAAAACCTGATCACCGCCAGTCATGCATTACTGCCTGGCTGGACTATTCCACAATGGCAAGTACCGGAT
GAAGTCAAACTACCGAAAACCTTGACGCTGGTTTATCACCTACCGATAGAACTTCATACCATGGCAGAACGCCTACAGGC
GACACTGGCCGCGGAAGGCTGTGAACTTACAATTATTTTTCATAACGCAAAAAACTGGGACGACACGACCCTACTGGCAC
ACGCAGACCTCATGATGGGCGACAGGTTAATTGGCGAAGCACCGGAATATACCCTGGAGCAATGGCTGCGTTGCGATCCA
CTGTGGCCACATGTTTTCGACGCTCCAGCATATGCACATTTGCAATCGACACTGGACGCTGTGCAAGTAATGCCTGATGA
GGAAAACCGATTTAATGCCCTGAAAACGGTCTTTAGCCAGTTAATGGCAGACGCGACGCTGACGCCGCTGTTCAACTATC
ACTATCGCATTAGCGCCCCTCCCGGCGTGAACGGTGTGCGGCTGACACCGCGAGGCTGGTTTGAATTTACCGAAGCCTGG
CTTCCCGCGCCGTCGCAATGA

Upstream 100 bases:

>100_bases
TTTCTTTCTCCACTCTGTGACACGGTTAATAGTGATTGAGTATCACCTGATATATACGGAAGTAATAGTGAATAGTTAAA
TAATATTGTTCCGGGTTTAT

Downstream 100 bases:

>100_bases
ATAGCTGGTCCGGGTTAATCGCAGGCGTTACCATAACGCTTTTATTGTTCAAGCAGGATTATCTATGAAACGTGCTGTCG
TTGTGTTCAGTGGAGGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRYAM
MEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
HTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKATHLHQRLLMLLQLSALHQLFISVKRIEVTHPQCLIFFLHR
PDYWLAHRLASYCSHLAHPQLPLVGTGPFRLTQFTPELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKTVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ

Sequences:

>Translated_566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRYAM
MEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
HTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKATHLHQRLLMLLQLSALHQLFISVKRIEVTHPQCLIFFLHR
PDYWLAHRLASYCSHLAHPQLPLVGTGPFRLTQFTPELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKTVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ
>Mature_566_residues
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRYAM
MEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
HTQRPIGDLAHHWETSADGLRWDFYLRSTLHWHNGDAVKATHLHQRLLMLLQLSALHQLFISVKRIEVTHPQCLIFFLHR
PDYWLAHRLASYCSHLAHPQLPLVGTGPFRLTQFTPELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQI
TIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPD
EVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKTVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAW
LPAPSQ

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786650, Length=566, Percent_Identity=97.3498233215548, Blast_Score=1115, Evalue=0.0,
Organism=Escherichia coli, GI1786256, Length=583, Percent_Identity=27.958833619211, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65013; Mature: 65013

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
RGKRGQLRFLVTPESLRYAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNHTQRPIGDLAHHWETSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
RWDFYLRSTLHWHNGDAVKATHLHQRLLMLLQLSALHQLFISVKRIEVTHPQCLIFFLHR
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEEC
PDYWLAHRLASYCSHLAHPQLPLVGTGPFRLTQFTPELVRLESHDYYHLRHPLLKAVEYW
CCHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHHEECCCCCHHHHHHHHHHHHHH
ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK
CCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
VISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPDEVKLPKTLTLVYHLPIELHT
HHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHCCCC
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKTVFSQLMADATLTPLFNYHYRISAP
CCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHCHHCCCCEEEECC
PGVNGVRLTPRGWFEFTEAWLPAPSQ
CCCCCEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
RGKRGQLRFLVTPESLRYAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNHTQRPIGDLAHHWETSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
RWDFYLRSTLHWHNGDAVKATHLHQRLLMLLQLSALHQLFISVKRIEVTHPQCLIFFLHR
EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEEC
PDYWLAHRLASYCSHLAHPQLPLVGTGPFRLTQFTPELVRLESHDYYHLRHPLLKAVEYW
CCHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHHEECCCCCHHHHHHHHHHHHHH
ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK
CCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHH
VISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPDEVKLPKTLTLVYHLPIELHT
HHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCHHHCCCCHHHHHHHHCCCC
LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKTVFSQLMADATLTPLFNYHYRISAP
CCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHCHHCCCCEEEECC
PGVNGVRLTPRGWFEFTEAWLPAPSQ
CCCCCEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]