| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549333
Identifier: 218549333
GI number: 218549333
Start: 2054766
End: 2055386
Strand: Direct
Name: 218549333
Synonym: EFER_1998
Alternate gene names: NA
Gene position: 2054766-2055386 (Clockwise)
Preceding gene: 218549332
Following gene: 218549334
Centisome position: 44.78
GC content: 53.46
Gene sequence:
>621_bases ATGATTGACGCACTGCTACAGGAAAAAATCACCACGCGACTGATCGATACCGCCCCCACAATTCCGGTCGGTGTTTCTAA TCGTCATGTGCATCTGTCGCAGCAGGATGTAGAAGCGCTTTTTGGTGTTGGCTACCAACTTACGCCCTTTAAGCCGTTGC GCCAGCCAGGGCAATTCGCCGCTGAAGAGTGTGTGACGGTTGTCGGCCCGAAAGGTTCTCTGACTCACGTCCGCGTACTT GGCCCGGTTCGCCCGACAAGCCAGCTGGAAATCTCCCGTGCCGATTGTTTTACTCTCGGCATTAAAGCGCCAGTGCGTGA ATCCGGGCAACTGGAAAATGCCGGTGACGCACTGTTGGTGGGGCCGAAAGGTCATGTTGAGTTGCATTCACAAGTCATTT GCGCCTGGCGGCATATTCATATGTCTCCCCAGGATGCTCGTCTGTTGAATGTCAGCAATGGGCAGAAGGTGAGTGTTCGC AGTCACGGTGAACGCCAGTTAACGTTCGATGAAGTGGTGGTACGGGTGCGCAATGATTTTGCCCTTGAACTGCATATCGA TACGGAAGAAGCCAATGCTGCCGGACTGAAAAACGGGGCACAGGTAACACTGATTCGCTAA
Upstream 100 bases:
>100_bases TTTCTACAGATACTGAAACTGCAATGCCTGTAGCTGAGAAAGAAGTGCAAGCCCCCATTGTGGAAGTGAAAAGCCACGGG CATAAGAAAGGGAAAAAAGC
Downstream 100 bases:
>100_bases GGGAGGCCATCATGACCGAACAACAGATCGACACCATCGTCAACCTGATCCTCCAGCGGCTGCAACCTGCGGTACTGGTC ATGGTGACATCAGCGGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFAAEECVTVVGPKGSLTHVRVL GPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLVGPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVR SHGERQLTFDEVVVRVRNDFALELHIDTEEANAAGLKNGAQVTLIR
Sequences:
>Translated_206_residues MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFAAEECVTVVGPKGSLTHVRVL GPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLVGPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVR SHGERQLTFDEVVVRVRNDFALELHIDTEEANAAGLKNGAQVTLIR >Mature_206_residues MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFAAEECVTVVGPKGSLTHVRVL GPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLVGPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVR SHGERQLTFDEVVVRVRNDFALELHIDTEEANAAGLKNGAQVTLIR
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22510; Mature: 22510
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFA CCHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHCCCEEECCCHHHCCCCHHH AEECVTVVGPKGSLTHVRVLGPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLV HHHEEEEECCCCCEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEE GPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVRSHGERQLTFDEVVVRVRNDF CCCCCEEHHHHHEEEHHHCCCCCCCCEEEECCCCCEEEEECCCCCEEEHHHHHHEECCCE ALELHIDTEEANAAGLKNGAQVTLIR EEEEEEECCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFA CCHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHCCCEEECCCHHHCCCCHHH AEECVTVVGPKGSLTHVRVLGPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLV HHHEEEEECCCCCEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEE GPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVRSHGERQLTFDEVVVRVRNDF CCCCCEEHHHHHEEEHHHCCCCCCCCEEEECCCCCEEEEECCCCCEEEHHHHHHEECCCE ALELHIDTEEANAAGLKNGAQVTLIR EEEEEEECCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA