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The map label for this gene is 218549301

Identifier: 218549301

GI number: 218549301

Start: 2008972

End: 2010477

Strand: Reverse

Name: 218549301

Synonym: EFER_1963

Alternate gene names: NA

Gene position: 2010477-2008972 (Counterclockwise)

Preceding gene: 218549302

Following gene: 218549300

Centisome position: 43.81

GC content: 59.16

Gene sequence:

>1506_bases
TTGAGGCAGGGACATTCAGCGTGCGGTTTAACGTGGACGGTGGCGCGATGGTCTACCGGATACACGCTGACACCGAGGAC
AATCCATTCAGTGGCGGGCTTTTCAGCCAGTTCAGGCTGTCGGACACGCTGTACTGAGGAGACAAGGATGAGCAATAACG
TACTGACACAAACTATCGTTACCGGCAGTGACCCGCGTGGCCTGCCAGAGTTCAGCGCCATCCGCGAGGAAATCAACAAG
GCCAGCCATCCGTCGCAGCCGGAGCTGAACTGGAAACTGGTGGAGTCGCTGGCGCTGGCGATATTTAAGGCCAACGGCGT
GGATTTGCATACCGCCACCTACTACACGCTGGCCCGGACCCGGACACAGGGGCTGACGGGATTCTGCGAAGGGGCGGAGC
TGCTGGCGGCGATGGTGACTCACGAGTGGGATAATTTCTGGCCGCAGGGCGGCCCGGCGCGGACCGAGATGCTGGACTGG
TTCAACACCCGCACCGGGAATATCCTGCGCCAGCAGATATCCTTTGTGGAGGCTGACCTGCCCCTGTTATACCGTACAGA
ACGGGCATTACAGCTTATCTGCGACAAACTCCAGCAGGTGGAACTGAAGCGCCAGCCGCGTGTGGAAAACCTGCTTTATT
TTGTCCAGAACACCCGTAAACGGCTTGAGCCGCAGCCGAAAAGCAGCGTTGAACACACCGCACAGACCACGGTCAGAACG
CTGATTTATGCCCCGGAAAACGGCACTGCGCTGGCAACTGAAACGGTGATGCCGCCGCTGCCCGAACTGCCGGAGATGAA
GGTGGAAGTGCGCAGCCTGGCTGACAGCACGCCACTGGCCAGTGTGGCAAAGCAGGGCAGTGCGGCGAAAGGTTTTATCG
CGGGTGTTGTCTGCTCTGCGGCTGTCGTCGCCGCGCTCTGTTGGTGGCTGGTCTCTCCCATGCAACAACAACTCAACCAG
GTCCGTGACACCGCGCAGGGCGCTGCGACAGTCTGGCTGGCGTCGCCTGAACTGGAAAACTATGAGCGCAGGCTACAGCA
ACTCCTTGATGCCCCTCCGGTTCAGCCGCTGGATACGGGCGTGCAGATGGCGCGTACCGCCGACAGTCGCTGGCCGGAGA
GCCTGCAACAGCAGCAGGCTACCGCACAGTGGAATGAGACGCTGAAAACCCGCGCACAGAGTAGTCCACAGTTACGCGGC
TGGTTACAGACCCGCCAGGACTTACATGCCTTTGCAGACCTCGTGATGAAACGTGAGAAAGAGGGGGTAACCCTTTCCTA
CATCAAAAATGTTATCTGGCAGGCGGAGCGGGGGCTGGGGCAGGAAACACCCGTTGAGTCCCTGCTGACGCAGTACCAGG
ACGCCCGTGCGCAGGGGCAGAATACCGACGTGCTGGAAAAACAGATTAATGAGCGGCTGGACGGCGTGTTAAGTCGTTGG
CTATTGCTGAAAAATCAAACGATGCCGGAGACGGCGACCGGAGCAAAATCCGGCAGTAATAACTGA

Upstream 100 bases:

>100_bases
CTGACGCTGATAGGCGTCAGTGGCGGAGCGCCGCGCAGTATCCGTTTCACCGGGCCGTGGGCGCAGTTCCGCCTGTTCGG
GGCAGGGCAGTTAACCAGCG

Downstream 100 bases:

>100_bases
ACTGAAGGAGTATTTTTATGGCTAATTTAATTTATCTGACACTGAATGGACAAAACCAGGGACTGATATCAGCAGGATGT
TCCTCACTGGACTCTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Protein VasL

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MRQGHSACGLTWTVARWSTGYTLTPRTIHSVAGFSASSGCRTRCTEETRMSNNVLTQTIVTGSDPRGLPEFSAIREEINK
ASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLARTRTQGLTGFCEGAELLAAMVTHEWDNFWPQGGPARTEMLDW
FNTRTGNILRQQISFVEADLPLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRLEPQPKSSVEHTAQTTVRT
LIYAPENGTALATETVMPPLPELPEMKVEVRSLADSTPLASVAKQGSAAKGFIAGVVCSAAVVAALCWWLVSPMQQQLNQ
VRDTAQGAATVWLASPELENYERRLQQLLDAPPVQPLDTGVQMARTADSRWPESLQQQQATAQWNETLKTRAQSSPQLRG
WLQTRQDLHAFADLVMKREKEGVTLSYIKNVIWQAERGLGQETPVESLLTQYQDARAQGQNTDVLEKQINERLDGVLSRW
LLLKNQTMPETATGAKSGSNN

Sequences:

>Translated_501_residues
MRQGHSACGLTWTVARWSTGYTLTPRTIHSVAGFSASSGCRTRCTEETRMSNNVLTQTIVTGSDPRGLPEFSAIREEINK
ASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLARTRTQGLTGFCEGAELLAAMVTHEWDNFWPQGGPARTEMLDW
FNTRTGNILRQQISFVEADLPLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRLEPQPKSSVEHTAQTTVRT
LIYAPENGTALATETVMPPLPELPEMKVEVRSLADSTPLASVAKQGSAAKGFIAGVVCSAAVVAALCWWLVSPMQQQLNQ
VRDTAQGAATVWLASPELENYERRLQQLLDAPPVQPLDTGVQMARTADSRWPESLQQQQATAQWNETLKTRAQSSPQLRG
WLQTRQDLHAFADLVMKREKEGVTLSYIKNVIWQAERGLGQETPVESLLTQYQDARAQGQNTDVLEKQINERLDGVLSRW
LLLKNQTMPETATGAKSGSNN
>Mature_501_residues
MRQGHSACGLTWTVARWSTGYTLTPRTIHSVAGFSASSGCRTRCTEETRMSNNVLTQTIVTGSDPRGLPEFSAIREEINK
ASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLARTRTQGLTGFCEGAELLAAMVTHEWDNFWPQGGPARTEMLDW
FNTRTGNILRQQISFVEADLPLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRLEPQPKSSVEHTAQTTVRT
LIYAPENGTALATETVMPPLPELPEMKVEVRSLADSTPLASVAKQGSAAKGFIAGVVCSAAVVAALCWWLVSPMQQQLNQ
VRDTAQGAATVWLASPELENYERRLQQLLDAPPVQPLDTGVQMARTADSRWPESLQQQQATAQWNETLKTRAQSSPQLRG
WLQTRQDLHAFADLVMKREKEGVTLSYIKNVIWQAERGLGQETPVESLLTQYQDARAQGQNTDVLEKQINERLDGVLSRW
LLLKNQTMPETATGAKSGSNN

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55911; Mature: 55911

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGHSACGLTWTVARWSTGYTLTPRTIHSVAGFSASSGCRTRCTEETRMSNNVLTQTIV
CCCCCCCCCCEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHCCHHHHHHCCHHHHHEE
TGSDPRGLPEFSAIREEINKASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLART
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
RTQGLTGFCEGAELLAAMVTHEWDNFWPQGGPARTEMLDWFNTRTGNILRQQISFVEADL
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRLEPQPKSSVEHTAQTTVRT
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LIYAPENGTALATETVMPPLPELPEMKVEVRSLADSTPLASVAKQGSAAKGFIAGVVCSA
HEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH
AVVAALCWWLVSPMQQQLNQVRDTAQGAATVWLASPELENYERRLQQLLDAPPVQPLDTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHH
VQMARTADSRWPESLQQQQATAQWNETLKTRAQSSPQLRGWLQTRQDLHAFADLVMKREK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EGVTLSYIKNVIWQAERGLGQETPVESLLTQYQDARAQGQNTDVLEKQINERLDGVLSRW
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLLKNQTMPETATGAKSGSNN
HHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQGHSACGLTWTVARWSTGYTLTPRTIHSVAGFSASSGCRTRCTEETRMSNNVLTQTIV
CCCCCCCCCCEEEEEECCCCCEECHHHHHHHHCCCCCCCCHHHCCHHHHHHCCHHHHHEE
TGSDPRGLPEFSAIREEINKASHPSQPELNWKLVESLALAIFKANGVDLHTATYYTLART
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
RTQGLTGFCEGAELLAAMVTHEWDNFWPQGGPARTEMLDWFNTRTGNILRQQISFVEADL
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRLEPQPKSSVEHTAQTTVRT
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LIYAPENGTALATETVMPPLPELPEMKVEVRSLADSTPLASVAKQGSAAKGFIAGVVCSA
HEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH
AVVAALCWWLVSPMQQQLNQVRDTAQGAATVWLASPELENYERRLQQLLDAPPVQPLDTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHH
VQMARTADSRWPESLQQQQATAQWNETLKTRAQSSPQLRGWLQTRQDLHAFADLVMKREK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EGVTLSYIKNVIWQAERGLGQETPVESLLTQYQDARAQGQNTDVLEKQINERLDGVLSRW
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLLKNQTMPETATGAKSGSNN
HHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA