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The map label for this gene is fliH [H]

Identifier: 218549265

GI number: 218549265

Start: 1978338

End: 1979024

Strand: Direct

Name: fliH [H]

Synonym: EFER_1925

Alternate gene names: 218549265

Gene position: 1978338-1979024 (Clockwise)

Preceding gene: 218549264

Following gene: 218549266

Centisome position: 43.11

GC content: 56.48

Gene sequence:

>687_bases
ATGTCTGATAATCTGCCGTGGAAAACCTGGATGCCGGACGATCTCGCCCCACCACAGGCGGAGTTTGTACCCGTGGTTGA
GCCTGAAGAGATCACCACTGAAGAGACCGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAATGCAGGCCCACGAGC
AAGGTTATCAGGCAGGTATTGCCGAAGGTCGTCAGAAAGGCCACGAACAAGGCTATCAGGAAGGCCTGGCCCAGGGGCTG
GAACAAGGTCTGGCAGAGGCGAAGTCTCAACAAGCGCCGATTCATGCCCGAATGCAGCAACTGGTCAGTGAGTTTCAAAC
TACCCTTGATGCGCTTGATAGTGTGATTGCTTCGCGCCTGATGCAGATGGCGCTGGAGGCGGCGCGCCAGGTGATCGGCC
AGGCGCCAACGGTGGACAACTCAGCACTGATCAAACAGATCCAACTGTTGTTACAGCAAGAACCGTTATTCAGCGGTAAA
CCGCAGTTACGTGTACACCCGGATGATCTGCAACGTGTTGATGAGATGCTCGGCGCAACCTTAAGTTTGCATGGCTGGCG
CTTGCGTGGCGATCCGACACTCCATCCTGGTGGTTGTAAAGTCTCCGCCGATGAAGGCGACCTTGATGCCAGCGTCGCCA
CTCGTTGGCAAGAACTCTGCCGTCTGGCAGCACCTGGAGTGGTGTGA

Upstream 100 bases:

>100_bases
CGTCTGTCGCAGGTGGAAAACGAACAGAAAGCGATTCTGCTGATTGTGCGCCGCCTTGCCGAAACTGGCGAGATGGTGAT
TGGCAGCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
TGACTGCCCGACTGACACGCTGGCTGACCATGCTGGATAACTTTGAAGCCAAAATGGCGCAACTGCCCACGGTGCGTCGC
TACGGGCGATTAACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSDNLPWKTWMPDDLAPPQAEFVPVVEPEEITTEETEPSLEQQLAQLQMQAHEQGYQAGIAEGRQKGHEQGYQEGLAQGL
EQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQAPTVDNSALIKQIQLLLQQEPLFSGK
PQLRVHPDDLQRVDEMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Sequences:

>Translated_228_residues
MSDNLPWKTWMPDDLAPPQAEFVPVVEPEEITTEETEPSLEQQLAQLQMQAHEQGYQAGIAEGRQKGHEQGYQEGLAQGL
EQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQAPTVDNSALIKQIQLLLQQEPLFSGK
PQLRVHPDDLQRVDEMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
>Mature_227_residues
SDNLPWKTWMPDDLAPPQAEFVPVVEPEEITTEETEPSLEQQLAQLQMQAHEQGYQAGIAEGRQKGHEQGYQEGLAQGLE
QGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQAPTVDNSALIKQIQLLLQQEPLFSGKP
QLRVHPDDLQRVDEMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=228, Percent_Identity=95.1754385964912, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25055; Mature: 24923

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLPWKTWMPDDLAPPQAEFVPVVEPEEITTEETEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEGRQKGHEQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQAPTVDNSALIKQIQLLLQQEPLFSGKPQLRVHPDDLQRVDEMLGAT
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCCH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDNLPWKTWMPDDLAPPQAEFVPVVEPEEITTEETEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEGRQKGHEQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQAPTVDNSALIKQIQLLLQQEPLFSGKPQLRVHPDDLQRVDEMLGAT
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCCH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]