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The map label for this gene is ycdZ [H]

Identifier: 218549234

GI number: 218549234

Start: 1937092

End: 1937583

Strand: Reverse

Name: ycdZ [H]

Synonym: EFER_1894

Alternate gene names: 218549234

Gene position: 1937583-1937092 (Counterclockwise)

Preceding gene: 218549235

Following gene: 218549229

Centisome position: 42.22

GC content: 51.42

Gene sequence:

>492_bases
ATGCGCCGCATGAACATACTTATCTCAATTGCAATAACAACTGGCATTCTCTCCGGTATTTGGGGATGGGTGGCAGTTTC
GTTGGGTCTGCTAAGCTGGGCGGGTTTTCTGGGCTGTACAGCCTATTTTGCCTGTCCGCAAGGAGGCCTGAAGGGGCTGG
CGATCTCTGCATGTACGCTGTTAAGTGGAGTGGTGTGGGCGCTGGTAATCATTCATGGTAGTTCGCTGGCACCACAGCTG
GAAATAGTCAGTTATGTGCTGACCGGTATTGTGGCATTCCTGATGTGTGTGCAGGCTAAACAGCTACTGCTTTCTTTTGT
ACCAGGCACCTTTATTGGCGCATGTGCCACGTTCGCCGGGCAGGGCGACTGGAAATTGGTGCTGCCATCTCTGGCCCTGG
GGTTGGTGTTTGGATACGCAATGAAAAATAGTGGATTGTGGTTAGCGGCTCGCCGTGAAAAAAGTATCTCCCAGGCTGTA
ACACCAAAATAA

Upstream 100 bases:

>100_bases
GAAGAGTAAATGTGATCTAAATCACTGTGCAATGCAACATGAGTGTTGCATTGCATAAAATGTGTGCGCGATCTCATTTG
TTGCGCACTTTTCTGCTATC

Downstream 100 bases:

>100_bases
AAGCGTGCGGGGTAACCGCACGCTTTTATACATCACATCAGGATTCTGGGGGAACAGACATATGACGGTATTTCACCAGA
ATGTCGTTTTGTCTGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRRMNILISIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISACTLLSGVVWALVIIHGSSLAPQL
EIVSYVLTGIVAFLMCVQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARREKSISQAV
TPK

Sequences:

>Translated_163_residues
MRRMNILISIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISACTLLSGVVWALVIIHGSSLAPQL
EIVSYVLTGIVAFLMCVQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARREKSISQAV
TPK
>Mature_163_residues
MRRMNILISIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISACTLLSGVVWALVIIHGSSLAPQL
EIVSYVLTGIVAFLMCVQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARREKSISQAV
TPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=160, Percent_Identity=86.875, Blast_Score=275, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17134; Mature: 17134

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMNILISIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISACTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LSGVVWALVIIHGSSLAPQLEIVSYVLTGIVAFLMCVQAKQLLLSFVPGTFIGACATFAG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
QGDWKLVLPSLALGLVFGYAMKNSGLWLAARREKSISQAVTPK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCC
>Mature Secondary Structure
MRRMNILISIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISACTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LSGVVWALVIIHGSSLAPQLEIVSYVLTGIVAFLMCVQAKQLLLSFVPGTFIGACATFAG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
QGDWKLVLPSLALGLVFGYAMKNSGLWLAARREKSISQAVTPK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9457880 [H]