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The map label for this gene is csgF [H]

Identifier: 218549232

GI number: 218549232

Start: 1935778

End: 1936194

Strand: Direct

Name: csgF [H]

Synonym: EFER_1891

Alternate gene names: 218549232

Gene position: 1935778-1936194 (Clockwise)

Preceding gene: 218549231

Following gene: 218549233

Centisome position: 42.19

GC content: 41.97

Gene sequence:

>417_bases
ATGCGTGTCCAACATGCGGTAGTACTGCTTATGCTTATTTCGCCACTCAGTTGGGCCGGAAATATGACATTCCAGTTCCG
TAATCCTAACTTTGGCGGTAATCCCAATAATGGTGCTTTTTTATTGAATAGTGCCCAGGCACAAAACTCCTATAAAGATC
CCAGCTATAACGACGATTTTGGTATAGAAACGCCCTCAGCACTGGATAACTTTACCCAGGCGATCCAGTCGCAAATATTA
GGCGGCTTACTGACCAATATAAATACCGGCAAACCAGGCAGACTGGTCACCAGTGATTTTATTGTTGATATTGCTAACCG
TGATGGCCAATTGCAATTAAACATTACGGACAGAAAAACTGGCAAAACATCAACTATTGAAGTCTCTGGTTTGCAAACAA
ACTCTACCGATTTTTAA

Upstream 100 bases:

>100_bases
CCGAAGAAGCGTTAAAACGTCGGCAAATAGATCAGGCGCTGTTAGGCACCGGTGATTTGGCGCACGATGAATTTTAATAC
TAATCAGTCCGGAGGCTATA

Downstream 100 bases:

>100_bases
GCCACAGCAACGTAAGGACCAACATCATGCAGCGCTTATTTGTTTTAGTGGCCGTTATTTTATTGAGCGGATGCTTAACC
GCGCCGCCAAAAGAAGGGGC

Product: curli assembly protein CsgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRVQHAVVLLMLISPLSWAGNMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRLVTSDFIVDIANRDGQLQLNITDRKTGKTSTIEVSGLQTNSTDF

Sequences:

>Translated_138_residues
MRVQHAVVLLMLISPLSWAGNMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRLVTSDFIVDIANRDGQLQLNITDRKTGKTSTIEVSGLQTNSTDF
>Mature_138_residues
MRVQHAVVLLMLISPLSWAGNMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRLVTSDFIVDIANRDGQLQLNITDRKTGKTSTIEVSGLQTNSTDF

Specific function: May be involved in the biogenesis of curli organelles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=138, Percent_Identity=92.7536231884058, Blast_Score=238, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018893 [H]

Pfam domain/function: PF10614 Tafi-CsgF [H]

EC number: NA

Molecular weight: Translated: 15024; Mature: 15024

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVQHAVVLLMLISPLSWAGNMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF
CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLTNINTGKPGRLVTSDFIVDIANRDGQLQLNITDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCC
GKTSTIEVSGLQTNSTDF
CCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MRVQHAVVLLMLISPLSWAGNMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF
CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLTNINTGKPGRLVTSDFIVDIANRDGQLQLNITDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCC
GKTSTIEVSGLQTNSTDF
CCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]