| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yeaN [H]
Identifier: 218549158
GI number: 218549158
Start: 1868453
End: 1869640
Strand: Direct
Name: yeaN [H]
Synonym: EFER_1812
Alternate gene names: 218549158
Gene position: 1868453-1869640 (Clockwise)
Preceding gene: 218549157
Following gene: 218549159
Centisome position: 40.72
GC content: 52.02
Gene sequence:
>1188_bases ATGTCCTCTTCATCAATACAACGTGGCAAAAACGGTTTTCTTTTGATTGCCGGAATGCTGATGATCGCCACAACTCTTCG CGTAACGTTTACTGGCGCAGCGCCTTTACTGGAGGCGATTCGTGCAGATTACGGTCTTACAACTGCCCAGACCGGCCTGT TGACTACCCTGCCTTTATTGGCATTTGCCCTGGTGTCTCCACTTGCCGCATCGATAGCACGTCGCTGGGGTATGGAGCGA AGTCTGTTTGCCGCCTTGCTGCTTATCTGCGCAGGTATTGCTATTCGTTCATTACCCTCTGCGGCATTGTTGTTTTGTGG CACAGCCATTATTGGCTGTGGAATTGCACTGGGGAATGTGCTCTTACCTGGCCTGATTAAACGTGATTTTTCCGGGTATG TTGCCAAATTGACAGGCGCTTATTCGCTCACTATGGGCGCAGCAGCGGCAATAGGATCTACACTGGTGGTTCCGCTGGCA CTGCATGGTTTTGGCTGGCGTGGCGCATTGCTGATGCTGATGTTTTTTCCGTTAATGGCCTTTATCGTCTGGCTGCCGCA ATGGAAAAGTCAGAACAACGCCTCGCTGGGAAATTCCCCGGCACTGCAACCACGTGGGATATGGCGTTCTCCACTTGCCT GGCAGGTTACACTTTTTCTCGGCATTAACTCACTCATCTATTACGTTATTATTGGCTGGCTTCCGGCAATTTTACTCAGT CAAGGATTCAGTGAGGCACAGGCTGGTTCAATCCATGGTTTGTTACAGCTGGCAACCGCAGCACCAGGTTTTCTGATCCC GCTTTTTCTTCACCATGTAAAGGATCAACGCGGCGTGGCGGTTATAGTCTCGTTAATGTGTGCCGTTGCCGCCGCTGGCC TGTGGTTTATCCCTGGGCAAGCTATCTTCTGGACGATTCTTTTTGGCTTTGGCTCCGGCGCAACCATGATCCTCGGCCTG ACATTTATCGGCCTGCGTGCCAGTTCAGCACATCAGGCGGCGGCACTCTCGGGAATGGCGCAATCCGTTGGTTATCTGTT AGCCGCTTGTGGGCCGCCGCTAATGGGTAAAATTCATGACAGCAGTGGCGACTGGCATATCCCGTTGATCGCTGTCGCTG CGCTTTCAACCATTATGGCTATTTTTGGTCTGTATGCCGGGCGTGACAAGGAAATCCAGGCATCGTGA
Upstream 100 bases:
>100_bases TTAGCCAAATCAAACCAATTATGTCATACCTCCGAAAACTCGCAGCAGGTCAGCCACTGCCGTAGTTAAGGTATGTCTCA ACTGATTTCATGGGAAGACG
Downstream 100 bases:
>100_bases ACATTCGCCATTGCTATAGTTTAGTCTGCCGTAAAAAGGTATCAGGAGTGACAAATGAATATTCAGTGCAAACGTGTCTA TGACCCAAAATCAGAAAGCG
Product: MFS superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSSSSIQRGKNGFLLIAGMLMIATTLRVTFTGAAPLLEAIRADYGLTTAQTGLLTTLPLLAFALVSPLAASIARRWGMER SLFAALLLICAGIAIRSLPSAALLFCGTAIIGCGIALGNVLLPGLIKRDFSGYVAKLTGAYSLTMGAAAAIGSTLVVPLA LHGFGWRGALLMLMFFPLMAFIVWLPQWKSQNNASLGNSPALQPRGIWRSPLAWQVTLFLGINSLIYYVIIGWLPAILLS QGFSEAQAGSIHGLLQLATAAPGFLIPLFLHHVKDQRGVAVIVSLMCAVAAAGLWFIPGQAIFWTILFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDSSGDWHIPLIAVAALSTIMAIFGLYAGRDKEIQAS
Sequences:
>Translated_395_residues MSSSSIQRGKNGFLLIAGMLMIATTLRVTFTGAAPLLEAIRADYGLTTAQTGLLTTLPLLAFALVSPLAASIARRWGMER SLFAALLLICAGIAIRSLPSAALLFCGTAIIGCGIALGNVLLPGLIKRDFSGYVAKLTGAYSLTMGAAAAIGSTLVVPLA LHGFGWRGALLMLMFFPLMAFIVWLPQWKSQNNASLGNSPALQPRGIWRSPLAWQVTLFLGINSLIYYVIIGWLPAILLS QGFSEAQAGSIHGLLQLATAAPGFLIPLFLHHVKDQRGVAVIVSLMCAVAAAGLWFIPGQAIFWTILFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDSSGDWHIPLIAVAALSTIMAIFGLYAGRDKEIQAS >Mature_394_residues SSSSIQRGKNGFLLIAGMLMIATTLRVTFTGAAPLLEAIRADYGLTTAQTGLLTTLPLLAFALVSPLAASIARRWGMERS LFAALLLICAGIAIRSLPSAALLFCGTAIIGCGIALGNVLLPGLIKRDFSGYVAKLTGAYSLTMGAAAAIGSTLVVPLAL HGFGWRGALLMLMFFPLMAFIVWLPQWKSQNNASLGNSPALQPRGIWRSPLAWQVTLFLGINSLIYYVIIGWLPAILLSQ GFSEAQAGSIHGLLQLATAAPGFLIPLFLHHVKDQRGVAVIVSLMCAVAAAGLWFIPGQAIFWTILFGFGSGATMILGLT FIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDSSGDWHIPLIAVAALSTIMAIFGLYAGRDKEIQAS
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=393, Percent_Identity=80.4071246819338, Blast_Score=595, Evalue=1e-171, Organism=Escherichia coli, GI1786536, Length=370, Percent_Identity=25.4054054054054, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41408; Mature: 41277
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSSIQRGKNGFLLIAGMLMIATTLRVTFTGAAPLLEAIRADYGLTTAQTGLLTTLPLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFALVSPLAASIARRWGMERSLFAALLLICAGIAIRSLPSAALLFCGTAIIGCGIALGNV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLPGLIKRDFSGYVAKLTGAYSLTMGAAAAIGSTLVVPLALHGFGWRGALLMLMFFPLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FIVWLPQWKSQNNASLGNSPALQPRGIWRSPLAWQVTLFLGINSLIYYVIIGWLPAILLS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFSEAQAGSIHGLLQLATAAPGFLIPLFLHHVKDQRGVAVIVSLMCAVAAAGLWFIPGQ CCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCH AIFWTILFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC SSGDWHIPLIAVAALSTIMAIFGLYAGRDKEIQAS CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SSSSIQRGKNGFLLIAGMLMIATTLRVTFTGAAPLLEAIRADYGLTTAQTGLLTTLPLL CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AFALVSPLAASIARRWGMERSLFAALLLICAGIAIRSLPSAALLFCGTAIIGCGIALGNV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLPGLIKRDFSGYVAKLTGAYSLTMGAAAAIGSTLVVPLALHGFGWRGALLMLMFFPLMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FIVWLPQWKSQNNASLGNSPALQPRGIWRSPLAWQVTLFLGINSLIYYVIIGWLPAILLS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFSEAQAGSIHGLLQLATAAPGFLIPLFLHHVKDQRGVAVIVSLMCAVAAAGLWFIPGQ CCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCH AIFWTILFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC SSGDWHIPLIAVAALSTIMAIFGLYAGRDKEIQAS CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]