Click here to switch to the map view.

The map label for this gene is ycgL

Identifier: 218549123

GI number: 218549123

Start: 1827874

End: 1828167

Strand: Reverse

Name: ycgL

Synonym: EFER_1775

Alternate gene names: 218549123

Gene position: 1828167-1827874 (Counterclockwise)

Preceding gene: 218549127

Following gene: 218549122

Centisome position: 39.84

GC content: 41.16

Gene sequence:

>294_bases
ATGCTTTGTGTGATCTATAGAAGTAGTAAACGTGATCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCACGTGT
TCCCGAAGAGCTGATGCAGGGATTCGGTAAACCACAACTGGCGATGATTCTGCCGTTGGACGGGCGTAAAAAATTAGTCA
ATGCTGATATTGAAAAAGTGAAAAAGGCGTTAACCGAGCAGGGATATTATTTGCAGTTACCGCCACCACCAGAAGATTTA
CTGAAACAGCATCTTTCTTTGACTGGGCATATCCGTACAGAGAGTGAGCAATAA

Upstream 100 bases:

>100_bases
TATCTTCCCGGTATGGGGAGATATTCCGAAGTCCAGAAGGCATGTTATAGTCACTATTATATTCAGGCAAGTCACCATCC
CATTAATTCAGAGTAAATGT

Downstream 100 bases:

>100_bases
CGGGTAGTCTCCAGGTCATTCCTGAATATCACTTAGCGTAGGGGAAAACTATGTACCAACATCATAACTGGCAAGGTGCG
CTGCTCGATTACCCGGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLCVIYRSSKRDQTYLYVEKKDDFSRVPEELMQGFGKPQLAMILPLDGRKKLVNADIEKVKKALTEQGYYLQLPPPPEDL
LKQHLSLTGHIRTESEQ

Sequences:

>Translated_97_residues
MLCVIYRSSKRDQTYLYVEKKDDFSRVPEELMQGFGKPQLAMILPLDGRKKLVNADIEKVKKALTEQGYYLQLPPPPEDL
LKQHLSLTGHIRTESEQ
>Mature_97_residues
MLCVIYRSSKRDQTYLYVEKKDDFSRVPEELMQGFGKPQLAMILPLDGRKKLVNADIEKVKKALTEQGYYLQLPPPPEDL
LKQHLSLTGHIRTESEQ

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=90, Percent_Identity=92.2222222222222, Blast_Score=174, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCGL_ESCF3 (B7LSK4)

Other databases:

- EMBL:   CU928158
- RefSeq:   YP_002382914.1
- EnsemblBacteria:   EBESCT00000124521
- GeneID:   7119933
- GenomeReviews:   CU928158_GR
- KEGG:   efe:EFER_1775
- GeneTree:   EBGT00050000009954
- HOGENOM:   HBG754037
- BioCyc:   EFER585054:EFER_1775-MONOMER
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 11247; Mature: 11247

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCVIYRSSKRDQTYLYVEKKDDFSRVPEELMQGFGKPQLAMILPLDGRKKLVNADIEKV
CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
KKALTEQGYYLQLPPPPEDLLKQHLSLTGHIRTESEQ
HHHHHCCCCEEECCCCHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MLCVIYRSSKRDQTYLYVEKKDDFSRVPEELMQGFGKPQLAMILPLDGRKKLVNADIEKV
CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
KKALTEQGYYLQLPPPPEDLLKQHLSLTGHIRTESEQ
HHHHHCCCCEEECCCCHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA