| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is cvrA [H]
Identifier: 218549112
GI number: 218549112
Start: 1813286
End: 1815019
Strand: Direct
Name: cvrA [H]
Synonym: EFER_1764
Alternate gene names: 218549112
Gene position: 1813286-1815019 (Clockwise)
Preceding gene: 218549111
Following gene: 218549115
Centisome position: 39.52
GC content: 50.58
Gene sequence:
>1734_bases TTGGATGCCACGACGATCATCAGTCTGTTTATTTTAGGGTCAGTGCTTGTTACCTGCAGTATTCTCCTCAGTTCGTTTTC TTCACGTCTTGGCATTCCTATTCTGGTTATCTTTTTGGCGATCGGTATGCTCGCCGGGGTCGATGGTGTCGGCGGTATTC CATTCGATAATTATCCCTTCGCTTATATGGTCAGCAACCTCGCACTGGCGGTCATTTTACTTGATGGCGGAATGCGTACC CAGGCCAGCTCGTTTCGTGTTGCTCTCGGCCCGGCACTCTCCCTCGCGACCGTGGGTGTGCTGATCACCTCAGGCCTGAC GGGCATGATGGCAGCCTGGTTATTTAATCTCGATTTGATCGAAGGATTATTAATTGGCGCAATTGTCGGTTCTACCGATG CTGCGGCAGTGTTTTCGCTGCTTGGTGGTAAAGGGCTTAACGAACGTGTTGGATCTACACTGGAAATAGAATCTGGCAGT AATGATCCGATGGCGGTGTTTTTAACCATTACGCTGATTGAAATGATCCAGCATCACGAAACAGGAGTCAGCTGGACCTT TGCATTGGATATTCTGCAACAGTTCGGCCTGGGTATCCTGTTGGGTCTGGGAGGTGGCTATTTACTTCAGCAGATGATTA ACCGTATCGCCCTGCCTGCCGGGCTTTATCCAATGCTGGCATTAAGCGGCGGTATCCTGATTTTTGCGCTGACTACAGCA CTTGAAGGCAGTGGCATTCTGGCAGTTTATCTATGTGGTTTCCTGCTCGGCAACCGACCGATTCGCAACCGCTACGGGAT ATTGCAAAACTTCGACGGTCTGGCGTGGCTGGCGCAAATCGCCATGTTCCTGGTGCTCGGTTTACTGGTTAATCCTTCTG ATCTGCTACCGATTGCTATTCCAGCACTACTTCTTTCCGCGTGGATGATTTTCTTTGCCCGTCCACTGTCAGTCTTTGCC GGACTTCTGCCTTTCCGCGGTTTTAATCTACGGGAACGTATTTTTATCAGTTGGGTCGGCTTACGCGGAGCTGTACCTAT TATTCTTGCGGTCTTTCCGATGATGGCCGGCCTGGATAATTCTCGTCTGTTCTTTAATGTGGCCTTCTTTGTGGTCTTAA TTTCACTGTTGTTTCAGGGAACGTCTCTCTCCTGGGCAGCAAAAAAAGCGAAAGTCGTGGTGCCTGCCGTTGGTTGGCCC GTCTCCCGCGTTGGTCTGGATATTCACCCGGAAAACCCGTGGGAACAGTTTGTTTATCAATTGAGTGCCGATAAATGGTG TGTCGGTGCAGCATTACGCGATCTGCATATGCCCAAAGACACACGAATAGCGGCACTGTTTCGCGACAACGTGCTGTTGC ATCCCTCGGGCAGTACCCGCCTGCGTGAAGGTGATGTACTTTGTGTGATTGGTCGTGAACGCGATCTTCCGGCGCTGGGC AAATTATTTAGTCAATCACCGCCTGTGGCCCTGGATCAGCGTTTCTTTGGTGATTTTATTCTTGAAGGGAGCGCCAAATT TGCTGATGTGGCGATTATTTATGGCCTCGATGCGGGCACTGAATATCGTGATAAACAACAGACGCTGGGCGAGATTGTAC AGCAACTACTCGGGGCCGCCCCGGTTGTGGGTGACCAGGTAGAATTCGCGGGGATGATTTGGACGGTTGCTGAAAAAGAG GATAATCAGGTCATGAAAGTGGGCGTTCGTGTCGCCGATGAGATTGCCGAATAA
Upstream 100 bases:
>100_bases TTAAAAAAAACGTGAATAAGCGTTAACTATCCCGCTGTTTCGGTCGTTAATATGGTAGTGTTGTTACTACGAAACAGCGT AATTTGGGAGAAACATAACG
Downstream 100 bases:
>100_bases ACTCATCATTACCGGAGAGAGACGACTGTCTTCTCCGGTATGAATGCGTTACACTGTCACTACTGGCACACGCAGTGCCA GAGCACACATCAACTCATAG
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MDATTIISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAVILLDGGMRT QASSFRVALGPALSLATVGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIEMIQHHETGVSWTFALDILQQFGLGILLGLGGGYLLQQMINRIALPAGLYPMLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALLLSAWMIFFARPLSVFA GLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLDNSRLFFNVAFFVVLISLLFQGTSLSWAAKKAKVVVPAVGWP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKDTRIAALFRDNVLLHPSGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEGSAKFADVAIIYGLDAGTEYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNQVMKVGVRVADEIAE
Sequences:
>Translated_577_residues MDATTIISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAVILLDGGMRT QASSFRVALGPALSLATVGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIEMIQHHETGVSWTFALDILQQFGLGILLGLGGGYLLQQMINRIALPAGLYPMLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALLLSAWMIFFARPLSVFA GLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLDNSRLFFNVAFFVVLISLLFQGTSLSWAAKKAKVVVPAVGWP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKDTRIAALFRDNVLLHPSGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEGSAKFADVAIIYGLDAGTEYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNQVMKVGVRVADEIAE >Mature_577_residues MDATTIISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAVILLDGGMRT QASSFRVALGPALSLATVGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIEMIQHHETGVSWTFALDILQQFGLGILLGLGGGYLLQQMINRIALPAGLYPMLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALLLSAWMIFFARPLSVFA GLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLDNSRLFFNVAFFVVLISLLFQGTSLSWAAKKAKVVVPAVGWP VSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKDTRIAALFRDNVLLHPSGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEGSAKFADVAIIYGLDAGTEYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKE DNQVMKVGVRVADEIAE
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=577, Percent_Identity=93.4142114384749, Blast_Score=1010, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 61988; Mature: 61988
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATTIISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AYMVSNLALAVILLDGGMRTQASSFRVALGPALSLATVGVLITSGLTGMMAAWLFNLDLI HHHHHHHHEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIEMIQHHE HHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHC TGVSWTFALDILQQFGLGILLGLGGGYLLQQMINRIALPAGLYPMLALSGGILIFALTTA CCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEHHH LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH PALLLSAWMIFFARPLSVFAGLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLDN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC SRLFFNVAFFVVLISLLFQGTSLSWAAKKAKVVVPAVGWPVSRVGLDIHPENPWEQFVYQ CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHCCEECCCCCHHHHHHHH LSADKWCVGAALRDLHMPKDTRIAALFRDNVLLHPSGSTRLREGDVLCVIGRERDLPALG HCCCCHHHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCEEECCCEEEEECCCCCCHHHH KLFSQSPPVALDQRFFGDFILEGSAKFADVAIIYGLDAGTEYRDKQQTLGEIVQQLLGAA HHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC PVVGDQVEFAGMIWTVAEKEDNQVMKVGVRVADEIAE CCCCCCCHHCEEEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDATTIISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AYMVSNLALAVILLDGGMRTQASSFRVALGPALSLATVGVLITSGLTGMMAAWLFNLDLI HHHHHHHHEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIEMIQHHE HHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHC TGVSWTFALDILQQFGLGILLGLGGGYLLQQMINRIALPAGLYPMLALSGGILIFALTTA CCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEHHH LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH PALLLSAWMIFFARPLSVFAGLLPFRGFNLRERIFISWVGLRGAVPIILAVFPMMAGLDN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC SRLFFNVAFFVVLISLLFQGTSLSWAAKKAKVVVPAVGWPVSRVGLDIHPENPWEQFVYQ CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHCCEECCCCCHHHHHHHH LSADKWCVGAALRDLHMPKDTRIAALFRDNVLLHPSGSTRLREGDVLCVIGRERDLPALG HCCCCHHHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCEEECCCEEEEECCCCCCHHHH KLFSQSPPVALDQRFFGDFILEGSAKFADVAIIYGLDAGTEYRDKQQTLGEIVQQLLGAA HHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC PVVGDQVEFAGMIWTVAEKEDNQVMKVGVRVADEIAE CCCCCCCHHCEEEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA