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The map label for this gene is rssB [H]

Identifier: 218549070

GI number: 218549070

Start: 1768808

End: 1769869

Strand: Reverse

Name: rssB [H]

Synonym: EFER_1720

Alternate gene names: 218549070

Gene position: 1769869-1768808 (Counterclockwise)

Preceding gene: 218549071

Following gene: 218549069

Centisome position: 38.57

GC content: 47.55

Gene sequence:

>1062_bases
GTGGCGATACCGTGCCACTATTGTTTAAAGCCAGTCAGGGGGGAGAATATGACGCAGCCATTGGTCGGAAAACAGATTCT
TATTGTGGAGGATGAGCCAGTGTTTCGCTCGCTTCTCGATTCGTGGTTTTCCTCATTGGGAGCGACAACGGCACTGGCAA
TGGATGGACTTGATGCACTTGATTTGTTGGTAAGCTATACCCCAGATCTCATCATCTGTGATATTGCAATGCCGCGAATG
AATGGCCTGAAGTTCATTGAACAAATCCGTAATCGTGGTGATCAGACACCAATCCTGGTCATCTCTGCGACGGAAAATAT
GGCCGATATAGCCAAAGCGTTGCGGTTGGGCGTTGATGATGTATTGCTTAAGCCCGTGAAAGATCTCAATCGCTTGCGTG
AAGCCGTATTAGCCAGCTTGTATCCAAATATGTTTAATTCCAGGGTAGAAGAGGAAGAGCGATTATTTCGTGACTGGGAT
GCGCTGGTGGAAAATCCACCGGCTGCCGCCAAACTTTTACAGGAACTGCAACCACCCGTTCAGCAAGTGATCTCTCACTG
TCGAATAAATTATCGGCAGTTGGTGGCCGTCGACCAACCGGGTTTAGTTCTGGATATTGCGCCGCTTTCGGATCAGGATC
TGGCTTTTTATTGTCTGGATGTAACAAGAGCCGGGAATAATGGTGTCCTGGCGGCACTATTACTGCGTGCATTATTTAAC
AGTTTATTACAAGAACAGTTGCTGCATCAGAATCAGCGATTGCCAGAATTAGGTGCCTTATTGAAGCAGGTCAATCATTT
GCTTCGCCAGGCGAATTTACCCGGACAATTTCCGTTGTTGGTGGGGTATTACCATAGCGGACTAAAAAATTTGATTCTGG
TTTCTGCTGGTCTTAACGCAACGCTGAATACTGGAACGCATCAGGTTCAAATCAGTAGCGGTGTACCGTTGGGGACTTTA
GGTAATGCGTACCTCAATCAATTAAGCCAGCACAGCGAAGCCTGGCAGTGCCAAATTTGGGGCGCGGGTGGAAGATTACG
CCTTATGTTGTCTGCGGAATGA

Upstream 100 bases:

>100_bases
CTCGCGGTAGAAAAAAAACTCGATGAGCTTTCACCGCTTGTGCGAGCCAACGGTTGACGCACATTTTTATCTACACTTAA
GTTAATTCTGACAGGCGCAT

Downstream 100 bases:

>100_bases
ACAATTGAGCGGGGGAAGTAAAATTGCCATACCCCGCTTTTCACAGCCAGTGATACTATCGTCACCAGTTATATAAGTAT
TTGTCTTAATTATGCTGATG

Product: response regulator of RpoS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MAIPCHYCLKPVRGENMTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAMDGLDALDLLVSYTPDLIICDIAMPRM
NGLKFIEQIRNRGDQTPILVISATENMADIAKALRLGVDDVLLKPVKDLNRLREAVLASLYPNMFNSRVEEEERLFRDWD
ALVENPPAAAKLLQELQPPVQQVISHCRINYRQLVAVDQPGLVLDIAPLSDQDLAFYCLDVTRAGNNGVLAALLLRALFN
SLLQEQLLHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNATLNTGTHQVQISSGVPLGTL
GNAYLNQLSQHSEAWQCQIWGAGGRLRLMLSAE

Sequences:

>Translated_353_residues
MAIPCHYCLKPVRGENMTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAMDGLDALDLLVSYTPDLIICDIAMPRM
NGLKFIEQIRNRGDQTPILVISATENMADIAKALRLGVDDVLLKPVKDLNRLREAVLASLYPNMFNSRVEEEERLFRDWD
ALVENPPAAAKLLQELQPPVQQVISHCRINYRQLVAVDQPGLVLDIAPLSDQDLAFYCLDVTRAGNNGVLAALLLRALFN
SLLQEQLLHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNATLNTGTHQVQISSGVPLGTL
GNAYLNQLSQHSEAWQCQIWGAGGRLRLMLSAE
>Mature_352_residues
AIPCHYCLKPVRGENMTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAMDGLDALDLLVSYTPDLIICDIAMPRMN
GLKFIEQIRNRGDQTPILVISATENMADIAKALRLGVDDVLLKPVKDLNRLREAVLASLYPNMFNSRVEEEERLFRDWDA
LVENPPAAAKLLQELQPPVQQVISHCRINYRQLVAVDQPGLVLDIAPLSDQDLAFYCLDVTRAGNNGVLAALLLRALFNS
LLQEQLLHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNATLNTGTHQVQISSGVPLGTLG
NAYLNQLSQHSEAWQCQIWGAGGRLRLMLSAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787487, Length=337, Percent_Identity=88.7240356083086, Blast_Score=590, Evalue=1e-170,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=36.1111111111111, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693157, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=100, Percent_Identity=31, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787229, Length=113, Percent_Identity=34.5132743362832, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789402, Length=101, Percent_Identity=29.7029702970297, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=123, Percent_Identity=30.0813008130081, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 39021; Mature: 38890

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPCHYCLKPVRGENMTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAMDGLDAL
CCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH
DLLVSYTPDLIICDIAMPRMNGLKFIEQIRNRGDQTPILVISATENMADIAKALRLGVDD
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCHHH
VLLKPVKDLNRLREAVLASLYPNMFNSRVEEEERLFRDWDALVENPPAAAKLLQELQPPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHH
QQVISHCRINYRQLVAVDQPGLVLDIAPLSDQDLAFYCLDVTRAGNNGVLAALLLRALFN
HHHHHHHCCCHHHEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
SLLQEQLLHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEEEECCCCC
TLNTGTHQVQISSGVPLGTLGNAYLNQLSQHSEAWQCQIWGAGGRLRLMLSAE
EECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEEECC
>Mature Secondary Structure 
AIPCHYCLKPVRGENMTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAMDGLDAL
CCCHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCHHHH
DLLVSYTPDLIICDIAMPRMNGLKFIEQIRNRGDQTPILVISATENMADIAKALRLGVDD
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCHHH
VLLKPVKDLNRLREAVLASLYPNMFNSRVEEEERLFRDWDALVENPPAAAKLLQELQPPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHH
QQVISHCRINYRQLVAVDQPGLVLDIAPLSDQDLAFYCLDVTRAGNNGVLAALLLRALFN
HHHHHHHCCCHHHEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
SLLQEQLLHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEEEECCCCC
TLNTGTHQVQISSGVPLGTLGNAYLNQLSQHSEAWQCQIWGAGGRLRLMLSAE
EECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]