Click here to switch to the map view.

The map label for this gene is yciB [H]

Identifier: 218549053

GI number: 218549053

Start: 1748392

End: 1748931

Strand: Direct

Name: yciB [H]

Synonym: EFER_1700

Alternate gene names: 218549053

Gene position: 1748392-1748931 (Clockwise)

Preceding gene: 218549052

Following gene: 218549054

Centisome position: 38.1

GC content: 43.52

Gene sequence:

>540_bases
ATGAAGCAGTTTCTTGATTTTCTACCGCTGGTTGTTTTTTTCGCGTTTTATAAGATTTATGACATCTATGCGGCCACTGC
GGCGCTTATCGTCGCCACCGCTATAGTGTTGATCTACAGTTGGGTGCGTTTTCGCAAAGTCGAAAAAATGGCCCTTATAA
CCTTTGTGTTAGTGGTCGTCTTCGGAGGACTAACACTGTTCTTCCATAATGATGAATTTATTAAATGGAAGGTGACAGTG
ATTTACGCTCTGTTTGCTGGTGCTTTGCTGGTCAGCCAGTGGGTTATGAAAAAACCACTGATCCAACGTATGTTGGGTAA
AGAACTATCGCTACCTCAACCGGTCTGGTCGAAACTAAATCTGGCCTGGGCCGTATTTTTCATCCTCTGTGGGCTGGCGA
ATATCTACATTGCATTCTGGCTACCACAAAACATTTGGGTGAATTTCAAAGTTTTTGGGCTGACAGCATTAACATTAATC
TTTACGCTGCTGAGCGGTGTTTATATCTACCGCCATCTTCCTCAGGACGATAAATCCTGA

Upstream 100 bases:

>100_bases
GTTGAGCAATCTTTTTTCTGCCGTTTTGCTCATTTATCTGTTCCGTCTGTATATGTTGATCCGCCAATAATCCTGAAGTA
TTTGATTACGGAATCGTAAA

Downstream 100 bases:

>100_bases
GCAAAGCGCCAGTCCTGCAGGGCTGGCGCTTTCTTTTCACCTCTGTTCTCGTTTCGCAAATCATAGTAGCATCGCGCCTG
TAATCTTTCTTTTAAGTCGG

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLVSQWVMKKPLIQRMLGKELSLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQDDKS

Sequences:

>Translated_179_residues
MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLVSQWVMKKPLIQRMLGKELSLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQDDKS
>Mature_179_residues
MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTV
IYALFAGALLVSQWVMKKPLIQRMLGKELSLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGVYIYRHLPQDDKS

Specific function: Involved in cell division; probably involved in intracellular septation [H]

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family [H]

Homologues:

Organism=Escherichia coli, GI1787507, Length=179, Percent_Identity=97.7653631284916, Blast_Score=352, Evalue=6e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006008 [H]

Pfam domain/function: PF04279 IspA [H]

EC number: NA

Molecular weight: Translated: 20730; Mature: 20730

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELSLPQPVWSKLN
HCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQDDKS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELSLPQPVWSKLN
HCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQDDKS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA