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The map label for this gene is ykgJ [H]

Identifier: 218549051

GI number: 218549051

Start: 1747157

End: 1747591

Strand: Direct

Name: ykgJ [H]

Synonym: EFER_1698

Alternate gene names: 218549051

Gene position: 1747157-1747591 (Clockwise)

Preceding gene: 218549049

Following gene: 218549052

Centisome position: 38.08

GC content: 48.74

Gene sequence:

>435_bases
ATGAATCGTTTCATTGTTGCAGGTGAAATCATGAGCGATCTTAATCCATGTATGTCGTGTGGAGCGTGTTGTGCTTTTTT
CCGTGTCTCTTTTTACTGGGCTGAAGGTAGTGATGCTGGAGGTTGCGTTCCGGTGGAATTGACTGAGCCCGTCAGTCCTT
TTTTGCGTTGTATGGCAGGAACAAAGCAAAAACCCTGCCGCTGCATTGCCCTTGACGGAACGCCTGGGGAATCGGTGAGC
TGCAAAATTTATCCAGACAGACCCTCAACCTGTCGGGAATTCAGCATTTCTGGCGAAGCAGGGGAAATCAACGAGGCCTG
TAATCGTGCCCGAGCATGGTACGGATTACCACTGCTTTACAAAGATATGCCTTTCCATACAAGTGCAGATGCTGCCACTG
AGGCATTAACCAGGGTACAATTGCCGGCTAATTAA

Upstream 100 bases:

>100_bases
ATTTAAATCAAATTCGATATATTCCCCTTACGGAAATATTCTTTTGCTTCCCTCTTGCGCTTACCGAAAGAGATGACTAA
TTTATTTTCCCACGTTATTA

Downstream 100 bases:

>100_bases
CACCTGCAAAAACTCAAGGAGAGTGCATGTCTATCACGGCGCAGTCCGTATACCGTGACACCGGAAACTTTTTCCGCAAT
CAATTTATGACCATCTTGTT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNRFIVAGEIMSDLNPCMSCGACCAFFRVSFYWAEGSDAGGCVPVELTEPVSPFLRCMAGTKQKPCRCIALDGTPGESVS
CKIYPDRPSTCREFSISGEAGEINEACNRARAWYGLPLLYKDMPFHTSADAATEALTRVQLPAN

Sequences:

>Translated_144_residues
MNRFIVAGEIMSDLNPCMSCGACCAFFRVSFYWAEGSDAGGCVPVELTEPVSPFLRCMAGTKQKPCRCIALDGTPGESVS
CKIYPDRPSTCREFSISGEAGEINEACNRARAWYGLPLLYKDMPFHTSADAATEALTRVQLPAN
>Mature_144_residues
MNRFIVAGEIMSDLNPCMSCGACCAFFRVSFYWAEGSDAGGCVPVELTEPVSPFLRCMAGTKQKPCRCIALDGTPGESVS
CKIYPDRPSTCREFSISGEAGEINEACNRARAWYGLPLLYKDMPFHTSADAATEALTRVQLPAN

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To A.calcoaceticus putative ferredoxin [H]

Homologues:

Organism=Escherichia coli, GI2367105, Length=109, Percent_Identity=70.6422018348624, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 15618; Mature: 15618

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFIVAGEIMSDLNPCMSCGACCAFFRVSFYWAEGSDAGGCVPVELTEPVSPFLRCMAG
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHCC
TKQKPCRCIALDGTPGESVSCKIYPDRPSTCREFSISGEAGEINEACNRARAWYGLPLLY
CCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEE
KDMPFHTSADAATEALTRVQLPAN
ECCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRFIVAGEIMSDLNPCMSCGACCAFFRVSFYWAEGSDAGGCVPVELTEPVSPFLRCMAG
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHCC
TKQKPCRCIALDGTPGESVSCKIYPDRPSTCREFSISGEAGEINEACNRARAWYGLPLLY
CCCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEE
KDMPFHTSADAATEALTRVQLPAN
ECCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]