| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yciQ [H]
Identifier: 218549041
GI number: 218549041
Start: 1735977
End: 1737872
Strand: Reverse
Name: yciQ [H]
Synonym: EFER_1689
Alternate gene names: 218549041
Gene position: 1737872-1735977 (Counterclockwise)
Preceding gene: 218549042
Following gene: 218549040
Centisome position: 37.87
GC content: 47.47
Gene sequence:
>1896_bases ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGTTGGGCTTTTTTTCTCTTCGTTGAGTTATCCGAAAAACACGGA GATCCCTTCTTATGAAGAAGGGATCTCGCTTTTTGATGTTGAAGCCACCCTGCAACCGGATGGGGTGCTCGACATCAAAG AGAACATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCACGACTATGGATGCAGCCT GATGGGGACGCAGCACTGCTGAACTATCGTATTGTTGGCGTCACCCGTGACGGCGTTCCTGAACCCTGGCATCTTGACTG GCATATCGGGTTAATGAGCATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT ATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACAACTGGCCGTTT GAAATTTATAAGACCCGATTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACCGG AGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAG ATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTGGTAATGCCCCGGCACCACAAACGACGAATATTTTCAGCCAT CTTCTTTTACCCTCTACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGCGTGTGGATGGTTATATCTCTGGAA GCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGAATGTTACGTC TCGATGCGAAGCTGGTTTACGACGATAAAGGTTTTTGTGCCGATATTGTAAATCTGATTGTGAAAGGAAAAATTCATCTG GAAGATCAGTATGACAAAAATCAGCAAACCCTGATCTGTGTTAATGAAGGTGCGACCAGAAATAATGCGGTATTACTGCC CGCAGAGCAGTTATTACTGGAAACGTTATTTCGTAAAGGTGACAAGGTCGTTCTTACGGGGGGGCGTAACAGAGTCTTAC GCAGTGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGACCTGATGCGTTTTTGCAA TGGGGCGGAATGGCAATATTGGCGGTCATTCTCTACGGTAACCTGAGTCCCGTAGGCTGGGCAGGAATGAGTCTGGTAGG CGATATGTTTATTATGATCTGCTGGCTTCTTCCTTTCTTATTTTGTTCCCTTGATCTTTTGTTTGCACGCGATGATGACA AGCCTTGCGTAAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGTGTGGCTTTTTACTCTCTCTACATC AATGTCGGAGATGTATTCTTTTACTGGTATATGCCTGCGGGTTATTTTAGCGCTGTTTTCCTGACCGGTTATCTCACTGG CATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATC TTGCGCGTAAAGAGGCAGCAACACACAGTGGGCGGCGGAGGAAAGGGGAAACACGGAAACTGGATTACGCTTTGTTAGGT TGGGCGGTCTCGGCAAACCTTGGCAGAGAATGGGCAGCACGTATCACCCCATCACTCACAGCGGCTGTTCGCGCTCCGGA AATTGCCCGTAGTGGCGTTTTGTTCTCATTACAGATGCACCTGAGTCTGGGGGCCAATACCAGTTTGTTGGGGCGAAGCT ATTCCGGTGGTGGTGCTGGCGGCGGTGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases GGTTATTGATCTCACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTAAAGCCTTTCTTATAACAAATTG CGTTCCACGGATGGAAGACT
Downstream 100 bases:
>100_bases TAAAGCTTATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCAGTTAAAA CGTCGAGTCGTTTACTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MAGKFRCILLLIVGLFFSSLSYPKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYRIVGVTRDGVPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPF EIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQTLICVNEGATRNNAVLLPAEQLLLETLFRKGDKVVLTGGRNRVLRSAFLRMQKFYLPRKKSSFYRPDAFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
Sequences:
>Translated_631_residues MAGKFRCILLLIVGLFFSSLSYPKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYRIVGVTRDGVPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPF EIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQTLICVNEGATRNNAVLLPAEQLLLETLFRKGDKVVLTGGRNRVLRSAFLRMQKFYLPRKKSSFYRPDAFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW >Mature_630_residues AGKFRCILLLIVGLFFSSLSYPKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD GDAALLNYRIVGVTRDGVPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPFE IYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSHL LLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLE DQYDKNQQTLICVNEGATRNNAVLLPAEQLLLETLFRKGDKVVLTGGRNRVLRSAFLRMQKFYLPRKKSSFYRPDAFLQW GGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYIN VGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGW AVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=94.6341463414634, Blast_Score=1179, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 71183; Mature: 71052
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFRCILLLIVGLFFSSLSYPKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYRIVGVTRDGVPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPFEIYKTRFSLQFSNIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQTLICVNEGATRNNAVLLPAEQLLLETLFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGGRNRVLRSAFLRMQKFYLPRKKSSFYRPDAFLQWGGMAILAVILYGNLSPVGW CEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMH HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHHHCCCHHHHCCEEEEEEEE LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGKFRCILLLIVGLFFSSLSYPKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYRIVGVTRDGVPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPFEIYKTRFSLQFSNIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQTLICVNEGATRNNAVLLPAEQLLLETLFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGGRNRVLRSAFLRMQKFYLPRKKSSFYRPDAFLQWGGMAILAVILYGNLSPVGW CEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMH HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHHHCCCHHHHCCEEEEEEEE LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]