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The map label for this gene is yciS [H]

Identifier: 218549027

GI number: 218549027

Start: 1721790

End: 1722098

Strand: Reverse

Name: yciS [H]

Synonym: EFER_1675

Alternate gene names: 218549027

Gene position: 1722098-1721790 (Counterclockwise)

Preceding gene: 218549028

Following gene: 218549026

Centisome position: 37.53

GC content: 44.01

Gene sequence:

>309_bases
GTGAAATATTTACTCATTTTCTTACTGGTGTTAGCGATTTTTGTGATTTCGGTAACATTGGGTGCGCAAAACGACCAAAT
AGTGACGTTTAATTATTTGTTGGCACAGGGTGAGTTTCGCATCTCAACCTTACTGGCTGTATTGTTTGCCGCTGGTTTTG
CTATTGGTTGGTTGATTTGTGGCCTTTTCTGGCTGCGTGTTCGCGTTTCTCTTGCTCGTGCTGAACGTAAAATTAAACGC
CTGGAAAATCAGCTTTCGCCTGCGACCGACGTTGCGGTAACGAATACTACGCCGGTTGTGAAGGAATAA

Upstream 100 bases:

>100_bases
GTTTTCCATTTCGCAGACGCCCTGAAAATGGTAATTTAGAAGGCTAATTGCGTTAAATTGAACATAATTTATTCGCTCTA
ACCACATAACGGGAAGTAAT

Downstream 100 bases:

>100_bases
TTATCTATGCTGGAGTTGTTGTTTCTGCTGTTACCTGTTGCCGCTGCCTATGGCTGGTATATGGGGCGCAGAAGTGCGCA
ACAAACAAAACAGGAGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQIVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVTNTTPVVKE

Sequences:

>Translated_102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQIVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVTNTTPVVKE
>Mature_102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQIVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVTNTTPVVKE

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=102, Percent_Identity=91.1764705882353, Blast_Score=185, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 11384; Mature: 11384

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLIFLLVLAIFVISVTLGAQNDQIVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLIC
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFWLRVRVSLARAERKIKRLENQLSPATDVAVTNTTPVVKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKYLLIFLLVLAIFVISVTLGAQNDQIVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLIC
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFWLRVRVSLARAERKIKRLENQLSPATDVAVTNTTPVVKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]