| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is dbpA [H]
Identifier: 218548978
GI number: 218548978
Start: 1673875
End: 1675248
Strand: Reverse
Name: dbpA [H]
Synonym: EFER_1626
Alternate gene names: 218548978
Gene position: 1675248-1673875 (Counterclockwise)
Preceding gene: 218548979
Following gene: 218548972
Centisome position: 36.51
GC content: 50.07
Gene sequence:
>1374_bases GTGACCGCTTTTTCCTCCCTTAACGTTTTGCCTGCCGCCCAACTTACAAATCTTAATGAGTTGGGCTATTTAACCATGAC ACCCGTGCAAGCTGCGGCGCTACCTGCAATTCTTGCCGGGAAAGATATTCGCGTACAAGCGAAAACCGGTAGTGGCAAAA CGGCGGCCTTTGGTCTCGGATTATTACAGCATATCGATGCCACTTTATTTCAGACACAGGCATTAGTGTTGTGTCCGACG CGTGAACTGGCAGATCAGGTTGCGGGGGAGCTGCGTCGCCTGGCACGTTTTCTGCCCAATACTAAAATCCTGACCTTATG TGGAGGTCAACCGTTCGGCATTCAGCGTGATTCATTACAACACGCTCCGCATATTATTGTAGCTACGCCGGGGCGTTTGT TAGATCACCTGCAAAAAGGCACCGTCTCGCTTGAAGCACTGCATACGCTGGTTATGGACGAAGCTGACAGAATGCTTGAT ATGGGATTTAGTGATGCCATCGATGAAGTCATTCGCTTTGCCCCGGCGTCACGACAGACGCTGTTATTCTCGGCTACCTG GCCAGAAGCTATTGCCGCCATCAGTGGGCGTGTACAGCGTGATCCACTCACCATTGAAATTGATAGCACCGATGCATTAC CGCCGGTTGAACAGCACTTTTACGAGACGTCATCATCAGGAAAGATTTCACTATTGCAACGTCTGCTGAGCGTATATCAA CCGTCATCTTGTGTGGTGTTCTGTAATACCAAAAAAGATTGTCAGTTGGTTTGTGATGCGCTAAACGACGTGGGGCAAAG CGCAATAGCGTTACATGGTGATTTAGAACAACGCGATCGTGATCAAACCCTGGTGCGTTTCGCTAACGGGAGTGTACGGA TATTAGTGGCCACAGATGTCGCCGCGCGTGGTCTGGATATTAAATCACTCGAGCTGGTCGTTAATTTTGAGCTGGCCTGG GATCCAGAAGTACATGTTCATCGCATCGGGCGTACTGCCCGAGCCGGGAAAAGTGGTCTGGCAATCAGCTTTTGCGCGCC GGAAGAGGCTCAGCGTGCCAATATCATCTCCGATATGTTGCAATTGAAACTGAACTGGCAAATGCCACCTGCGGTTACTA CCATCGTGCCACTGGCTGCTGAAATGGCTACCTTATGTATCGATGGTGGGAAAAAGGCCAAAATGCGTCCTGGCGATGTC CTTGGGGCATTAACCGGGGATATCGGGTTGGATGGTGCCGATATTGGTAAAATTACCGTGCATCCGGCGCATGTTTATGT CGCAGTACGACAAGAAGTGGCTCATAAAGCGTGGAAGCAATTACAGGACGGGAAAATTAAAGGCAAGACTTGCCGGGTAC GATTGCTGAAGTAA
Upstream 100 bases:
>100_bases CCACCACCAGATGAAGAACCGATTAAATTGTCGCATCGTGAGCGCAGATCTGCGAGGATACGCGCCTGCTAACTTTGCGC CGATGACCAAGAGAATAATT
Downstream 100 bases:
>100_bases CCTGAATGCCGGAAGCAATACAGAAGCATTTTCTCCGGCATACACATAACTGGATTAATACTGGTATTCATGCCCGATAA TCTTGCGCATCGGGCAATGA
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTAFSSLNVLPAAQLTNLNELGYLTMTPVQAAALPAILAGKDIRVQAKTGSGKTAAFGLGLLQHIDATLFQTQALVLCPT RELADQVAGELRRLARFLPNTKILTLCGGQPFGIQRDSLQHAPHIIVATPGRLLDHLQKGTVSLEALHTLVMDEADRMLD MGFSDAIDEVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLTIEIDSTDALPPVEQHFYETSSSGKISLLQRLLSVYQ PSSCVVFCNTKKDCQLVCDALNDVGQSAIALHGDLEQRDRDQTLVRFANGSVRILVATDVAARGLDIKSLELVVNFELAW DPEVHVHRIGRTARAGKSGLAISFCAPEEAQRANIISDMLQLKLNWQMPPAVTTIVPLAAEMATLCIDGGKKAKMRPGDV LGALTGDIGLDGADIGKITVHPAHVYVAVRQEVAHKAWKQLQDGKIKGKTCRVRLLK
Sequences:
>Translated_457_residues MTAFSSLNVLPAAQLTNLNELGYLTMTPVQAAALPAILAGKDIRVQAKTGSGKTAAFGLGLLQHIDATLFQTQALVLCPT RELADQVAGELRRLARFLPNTKILTLCGGQPFGIQRDSLQHAPHIIVATPGRLLDHLQKGTVSLEALHTLVMDEADRMLD MGFSDAIDEVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLTIEIDSTDALPPVEQHFYETSSSGKISLLQRLLSVYQ PSSCVVFCNTKKDCQLVCDALNDVGQSAIALHGDLEQRDRDQTLVRFANGSVRILVATDVAARGLDIKSLELVVNFELAW DPEVHVHRIGRTARAGKSGLAISFCAPEEAQRANIISDMLQLKLNWQMPPAVTTIVPLAAEMATLCIDGGKKAKMRPGDV LGALTGDIGLDGADIGKITVHPAHVYVAVRQEVAHKAWKQLQDGKIKGKTCRVRLLK >Mature_456_residues TAFSSLNVLPAAQLTNLNELGYLTMTPVQAAALPAILAGKDIRVQAKTGSGKTAAFGLGLLQHIDATLFQTQALVLCPTR ELADQVAGELRRLARFLPNTKILTLCGGQPFGIQRDSLQHAPHIIVATPGRLLDHLQKGTVSLEALHTLVMDEADRMLDM GFSDAIDEVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLTIEIDSTDALPPVEQHFYETSSSGKISLLQRLLSVYQP SSCVVFCNTKKDCQLVCDALNDVGQSAIALHGDLEQRDRDQTLVRFANGSVRILVATDVAARGLDIKSLELVVNFELAWD PEVHVHRIGRTARAGKSGLAISFCAPEEAQRANIISDMLQLKLNWQMPPAVTTIVPLAAEMATLCIDGGKKAKMRPGDVL GALTGDIGLDGADIGKITVHPAHVYVAVRQEVAHKAWKQLQDGKIKGKTCRVRLLK
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=37.1657754010695, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=31.5934065934066, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=37.8223495702006, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI45446747, Length=347, Percent_Identity=36.5994236311239, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI45446743, Length=347, Percent_Identity=36.5994236311239, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI224593278, Length=355, Percent_Identity=38.5915492957746, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI164664518, Length=361, Percent_Identity=31.3019390581717, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI262118318, Length=382, Percent_Identity=36.1256544502618, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI21071032, Length=392, Percent_Identity=34.4387755102041, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=36.8715083798883, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI50659095, Length=397, Percent_Identity=34.0050377833753, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI262231852, Length=382, Percent_Identity=36.1256544502618, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI216548263, Length=382, Percent_Identity=36.1256544502618, Blast_Score=211, Evalue=8e-55, Organism=Homo sapiens, GI13518015, Length=382, Percent_Identity=36.1256544502618, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=34.8773841961853, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI148613856, Length=387, Percent_Identity=33.8501291989664, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI38201710, Length=387, Percent_Identity=33.8501291989664, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.0967741935484, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.0967741935484, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.0967741935484, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI13129006, Length=347, Percent_Identity=36.0230547550432, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=31.4285714285714, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.7262569832402, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.7262569832402, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=36.5591397849462, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=36.5591397849462, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=34.3243243243243, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=35.3562005277045, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI38327634, Length=361, Percent_Identity=36.5650969529086, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=33.6182336182336, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=36.9186046511628, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI164419743, Length=333, Percent_Identity=36.3363363363363, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI51094101, Length=333, Percent_Identity=36.3363363363363, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=31.8965517241379, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=31.8302387267904, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI256223453, Length=400, Percent_Identity=30.75, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI41327776, Length=348, Percent_Identity=34.4827586206897, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI41327779, Length=393, Percent_Identity=32.3155216284987, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI13514831, Length=381, Percent_Identity=34.1207349081365, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI164419732, Length=343, Percent_Identity=31.1953352769679, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=29.8882681564246, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI6005743, Length=360, Percent_Identity=29.7222222222222, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI62241022, Length=340, Percent_Identity=30.2941176470588, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=30.6954436450839, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI62241024, Length=363, Percent_Identity=29.7520661157025, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=29.2746113989637, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=28.9940828402367, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=27.2980501392758, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=27.2980501392758, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI256773275, Length=356, Percent_Identity=32.3033707865169, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=33.0097087378641, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI154759257, Length=400, Percent_Identity=29.25, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI20336298, Length=234, Percent_Identity=34.6153846153846, Blast_Score=108, Evalue=8e-24, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=92.5601750547046, Blast_Score=872, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=364, Percent_Identity=42.5824175824176, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=40.1084010840108, Blast_Score=244, Evalue=8e-66, Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=36.1344537815126, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=37.6119402985075, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17507121, Length=382, Percent_Identity=32.1989528795811, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=32.6923076923077, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=32.9608938547486, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=38.7464387464387, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=31.4285714285714, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI115533224, Length=388, Percent_Identity=35.8247422680412, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI86570094, Length=346, Percent_Identity=37.8612716763006, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=36.986301369863, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=36.986301369863, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=37.2602739726027, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=30.4109589041096, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17510559, Length=366, Percent_Identity=35.2459016393443, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=34.8284960422164, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=36.4145658263305, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=36.2433862433862, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507877, Length=395, Percent_Identity=34.1772151898734, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI115532546, Length=361, Percent_Identity=33.7950138504155, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI115532548, Length=353, Percent_Identity=34.2776203966006, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI71999646, Length=350, Percent_Identity=34.5714285714286, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507879, Length=395, Percent_Identity=34.1772151898734, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=35.2601156069364, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17537549, Length=351, Percent_Identity=34.1880341880342, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17552642, Length=337, Percent_Identity=35.0148367952522, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17507881, Length=408, Percent_Identity=31.8627450980392, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=34.6153846153846, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17536099, Length=412, Percent_Identity=30.3398058252427, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536101, Length=412, Percent_Identity=30.3398058252427, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17536103, Length=412, Percent_Identity=30.3398058252427, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=31.1239193083574, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=29.8850574712644, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=28.4916201117318, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=30.3664921465969, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17556951, Length=367, Percent_Identity=28.8828337874659, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI193208216, Length=406, Percent_Identity=29.8029556650246, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17507641, Length=404, Percent_Identity=28.7128712871287, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.3546798029557, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=28.2967032967033, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI32564046, Length=430, Percent_Identity=28.6046511627907, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=32.4607329842932, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71997889, Length=408, Percent_Identity=27.2058823529412, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.8882175226586, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=25.2199413489736, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=35.8490566037736, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321360, Length=350, Percent_Identity=40, Blast_Score=223, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.9444444444444, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=36.968085106383, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=38.6486486486486, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=31.9783197831978, Blast_Score=212, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=33.7386018237082, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=350, Percent_Identity=37.7142857142857, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=33.9522546419098, Blast_Score=196, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=336, Percent_Identity=32.1428571428571, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=34.4827586206897, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=353, Percent_Identity=36.8271954674221, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=330, Percent_Identity=33.3333333333333, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=330, Percent_Identity=33.3333333333333, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=31.2, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=31.1475409836066, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=33.0508474576271, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=421, Percent_Identity=28.978622327791, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=440, Percent_Identity=28.8636363636364, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=356, Percent_Identity=29.2134831460674, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=26.2650602409639, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6321267, Length=350, Percent_Identity=29.7142857142857, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320173, Length=198, Percent_Identity=35.8585858585859, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=25.6906077348066, Blast_Score=107, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=412, Percent_Identity=23.5436893203883, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322876, Length=160, Percent_Identity=35.625, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=38.2022471910112, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=37.3937677053824, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24645031, Length=382, Percent_Identity=31.6753926701571, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=37.7094972067039, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI28574962, Length=394, Percent_Identity=35.2791878172589, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI28575014, Length=340, Percent_Identity=36.1764705882353, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=36.5217391304348, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI21356161, Length=385, Percent_Identity=34.2857142857143, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI281361218, Length=388, Percent_Identity=34.2783505154639, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644481, Length=388, Percent_Identity=34.2783505154639, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644483, Length=388, Percent_Identity=34.2783505154639, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644487, Length=388, Percent_Identity=34.2783505154639, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI45551833, Length=388, Percent_Identity=34.2783505154639, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644485, Length=388, Percent_Identity=34.2783505154639, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644479, Length=388, Percent_Identity=34.2783505154639, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=33.134328358209, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=33.134328358209, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=35.054347826087, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI24662330, Length=342, Percent_Identity=37.1345029239766, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=38.1471389645777, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=33.8935574229692, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI17977678, Length=350, Percent_Identity=34.8571428571429, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=32.9815303430079, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.0924369747899, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.0924369747899, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.0924369747899, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582080, Length=386, Percent_Identity=31.6062176165803, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24582078, Length=386, Percent_Identity=31.6062176165803, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI17136248, Length=386, Percent_Identity=31.6062176165803, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24582075, Length=386, Percent_Identity=31.6062176165803, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=34.3575418994413, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=34.3575418994413, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI281365720, Length=308, Percent_Identity=36.6883116883117, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=33.0708661417323, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI17647335, Length=349, Percent_Identity=29.2263610315186, Blast_Score=154, Evalue=8e-38, Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=28.6821705426357, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=28.8359788359788, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI18859659, Length=441, Percent_Identity=27.437641723356, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI28571338, Length=441, Percent_Identity=27.437641723356, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.9093655589124, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24666101, Length=367, Percent_Identity=31.0626702997275, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=29.8295454545455, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI20130173, Length=335, Percent_Identity=28.0597014925373, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI24640164, Length=379, Percent_Identity=24.2744063324538, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17136666, Length=222, Percent_Identity=27.9279279279279, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49428; Mature: 49297
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFSSLNVLPAAQLTNLNELGYLTMTPVQAAALPAILAGKDIRVQAKTGSGKTAAFGLG CCCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH LLQHIDATLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGIQRDSLQ HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC HAPHIIVATPGRLLDHLQKGTVSLEALHTLVMDEADRMLDMGFSDAIDEVIRFAPASRQT CCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE LLFSATWPEAIAAISGRVQRDPLTIEIDSTDALPPVEQHFYETSSSGKISLLQRLLSVYQ EEEECCCHHHHHHHCCCEECCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHC PSSCVVFCNTKKDCQLVCDALNDVGQSAIALHGDLEQRDRDQTLVRFANGSVRILVATDV CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEEEECCCCEEEEEEECH AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGKSGLAISFCAPEEAQRANIISDML HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH QLKLNWQMPPAVTTIVPLAAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKITV HEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE HPAHVYVAVRQEVAHKAWKQLQDGKIKGKTCRVRLLK ECCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC >Mature Secondary Structure TAFSSLNVLPAAQLTNLNELGYLTMTPVQAAALPAILAGKDIRVQAKTGSGKTAAFGLG CCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH LLQHIDATLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGIQRDSLQ HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC HAPHIIVATPGRLLDHLQKGTVSLEALHTLVMDEADRMLDMGFSDAIDEVIRFAPASRQT CCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE LLFSATWPEAIAAISGRVQRDPLTIEIDSTDALPPVEQHFYETSSSGKISLLQRLLSVYQ EEEECCCHHHHHHHCCCEECCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHC PSSCVVFCNTKKDCQLVCDALNDVGQSAIALHGDLEQRDRDQTLVRFANGSVRILVATDV CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEEEECCCCEEEEEEECH AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGKSGLAISFCAPEEAQRANIISDML HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH QLKLNWQMPPAVTTIVPLAAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKITV HEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE HPAHVYVAVRQEVAHKAWKQLQDGKIKGKTCRVRLLK ECCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]