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The map label for this gene is paaD [H]

Identifier: 218548957

GI number: 218548957

Start: 1649700

End: 1650197

Strand: Reverse

Name: paaD [H]

Synonym: EFER_1605

Alternate gene names: 218548957

Gene position: 1650197-1649700 (Counterclockwise)

Preceding gene: 218548958

Following gene: 218548956

Centisome position: 35.96

GC content: 56.63

Gene sequence:

>498_bases
ATGCAACGTCTGGTCACCATTGCGCCGCCGCAGGTGCATGAGATATGGGCGCTACTCAGCCAGATCCCGGACCCGGAAAT
CCCGGTGCTGACCATTACCGATTTAGGCATGGTACGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGC
CGACATATTCCGGTTGTCCGGCAACGGAACATCTGATTGGGGCGATACGTGAGGCAATGACAACCAACGGGTTTACCCCC
GTTCAGGTTGTGCTGCAACTCGACCCGGCGTGGACCACCGACTGGATGACCCCCGATGCCCGTGAGCGTCTGCGACAGTA
TGGCATTAGCCCGCCCGCCGGACACAGTTGCCATGCCCATTTGCCGCCAGAGGTGCGTTGCCCGCGCTGCGCCAGCGTCC
ATACCACACTTATCAGTGAATTTGGTTCCACGGCCTGCAAAGCATTGTATCGCTGCGATAGCTGTCGCGAACCTTTCGAT
TATTTCAAATGTATTTGA

Upstream 100 bases:

>100_bases
AAAAAGGGCTGCATACCGAACATCTTGGGCCAATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAA
TGGTAACAGAGGAGATGGGT

Downstream 100 bases:

>100_bases
GGATGCCATGACAACGTTTCATTCCTTAACGGTGGCAAAAGTGGAGCCGGAAACCCGTGATGCGGTGACCATTACCTTTG
CGGTGCCCCAGCCTTTGCAG

Product: multicomponent oxygenase/reductase subunit for phenylacetic acid degradation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MQRLVTIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTP
VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD
YFKCI

Sequences:

>Translated_165_residues
MQRLVTIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTP
VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD
YFKCI
>Mature_165_residues
MQRLVTIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTP
VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD
YFKCI

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=165, Percent_Identity=98.7878787878788, Blast_Score=340, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 18351; Mature: 18351

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLVTIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCP
CCCEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCC
ATEHLIGAIREAMTTNGFTPVQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAH
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MQRLVTIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCP
CCCEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCC
ATEHLIGAIREAMTTNGFTPVQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAH
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]