Click here to switch to the map view.

The map label for this gene is catC [H]

Identifier: 218548837

GI number: 218548837

Start: 1517197

End: 1517487

Strand: Direct

Name: catC [H]

Synonym: EFER_1480

Alternate gene names: 218548837

Gene position: 1517197-1517487 (Clockwise)

Preceding gene: 218548836

Following gene: 218548838

Centisome position: 33.06

GC content: 36.43

Gene sequence:

>291_bases
ATGTTATTTAAAGTCGATATGACTGTGAATATTCCACGTGATATTCCTTTTGCTGAAATCGAAGATATAAAAAAACGTGA
AAAAGATTATTCACAACAATTACAACGTGAAGGTAAATGGCGTCATATCTGGCGTGTTGCCGGTCTTTATGCCAATGTCA
GTATATTTGACGTTAAAGACGCCGAAGAATTACATGAATTATTAATGGCACTACCGCTATATCCGTTTATGGATATTAAT
GTAGAGGCGCTTTGCCGTCATCCTTCTTCAATTCGTGATGATGACCGTTAA

Upstream 100 bases:

>100_bases
CAGGTAACACTCCCCCAAACACCAGGACTGGGTGTGGAGCTGGATGAAGACAAATTGCGTTTCTATTCCCGTAAAAGAAA
CGCGGTAACAGGAGAGAACC

Downstream 100 bases:

>100_bases
TTAATATCTTACCTCATGCCGGATAACTCCGGCATTATCCTGGAACAATAAAAGTGAGAATAATATGAGCAATTCATTTG
TTAAACACGAAGATGTGCAG

Product: Muconolactone delta-isomerase

Products: NA

Alternate protein names: MIase [H]

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLFKVDMTVNIPRDIPFAEIEDIKKREKDYSQQLQREGKWRHIWRVAGLYANVSIFDVKDAEELHELLMALPLYPFMDIN
VEALCRHPSSIRDDDR

Sequences:

>Translated_96_residues
MLFKVDMTVNIPRDIPFAEIEDIKKREKDYSQQLQREGKWRHIWRVAGLYANVSIFDVKDAEELHELLMALPLYPFMDIN
VEALCRHPSSIRDDDR
>Mature_96_residues
MLFKVDMTVNIPRDIPFAEIEDIKKREKDYSQQLQREGKWRHIWRVAGLYANVSIFDVKDAEELHELLMALPLYPFMDIN
VEALCRHPSSIRDDDR

Specific function: Unknown

COG id: COG4829

COG function: function code Q; Muconolactone delta-isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the muconolactone Delta-isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR003464
- ProDom:   PD006619 [H]

Pfam domain/function: PF02426 MIase [H]

EC number: =5.3.3.4 [H]

Molecular weight: Translated: 11431; Mature: 11431

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKVDMTVNIPRDIPFAEIEDIKKREKDYSQQLQREGKWRHIWRVAGLYANVSIFDVKD
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC
AEELHELLMALPLYPFMDINVEALCRHPSSIRDDDR
HHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLFKVDMTVNIPRDIPFAEIEDIKKREKDYSQQLQREGKWRHIWRVAGLYANVSIFDVKD
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCC
AEELHELLMALPLYPFMDINVEALCRHPSSIRDDDR
HHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318 [H]