| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548826
Identifier: 218548826
GI number: 218548826
Start: 1506866
End: 1507450
Strand: Direct
Name: 218548826
Synonym: EFER_1468
Alternate gene names: NA
Gene position: 1506866-1507450 (Clockwise)
Preceding gene: 218548825
Following gene: 218548828
Centisome position: 32.84
GC content: 28.38
Gene sequence:
>585_bases ATGTCATTAAATCCATTTGACGTTAAGATAAATGAAAAATTTTGTGAAATTAACAAATCTGATTCAAAATCAAACTTATT AAAAGAAATAAGAGATAAGGTTTACCTTATACAACCATATGATAATTATGCCTTAACATTTTATCACAATACTTTGTATT ATTTCACTGCAAATAGCAAAAGATACATTGTCTTTGGTCACGATCTAGAAGGACATTTTGCAATTGAGGAAAAAAGCAGA AAAATCTATCACATAAGTAACGGTAAGAACGATCAATGTTCTTATTCATTGATTTTTTGCAATACAAATATAAATCATTT CATAAGCTTTAATAATATATTTATTTTTATGGTGCTTGAACAAGCTAAAATATTAAACTATGAAAATCAATGTGACTCTG ATGATGAGAAAATATTCGATATCCTGGACAATTATTTCACTGAATGTGATCCTTTATCGATGGCCGAGGACATGTTTTGG CATGTCAGATCCTACATGCTACGTGATGGTTTTTTCCCTACGAATGACACCCAAATTAATTTTTACAAAGATATGATGTT AAAATCAAACATGACTAATGAATGA
Upstream 100 bases:
>100_bases GCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTTCCCTGTAATATGGGGTGTTCACTTTTACAGGCTGCTCTTGAT AAATTAAAAGGAAGATAATT
Downstream 100 bases:
>100_bases TAATTAATTTACTTATAGTAATGGAATTGCTTATGAATTCCGCAGGACGGCATTTTTAACGGCACAGTCAACTCCCGACC GCCGCACACAGCAGACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSLNPFDVKINEKFCEINKSDSKSNLLKEIRDKVYLIQPYDNYALTFYHNTLYYFTANSKRYIVFGHDLEGHFAIEEKSR KIYHISNGKNDQCSYSLIFCNTNINHFISFNNIFIFMVLEQAKILNYENQCDSDDEKIFDILDNYFTECDPLSMAEDMFW HVRSYMLRDGFFPTNDTQINFYKDMMLKSNMTNE
Sequences:
>Translated_194_residues MSLNPFDVKINEKFCEINKSDSKSNLLKEIRDKVYLIQPYDNYALTFYHNTLYYFTANSKRYIVFGHDLEGHFAIEEKSR KIYHISNGKNDQCSYSLIFCNTNINHFISFNNIFIFMVLEQAKILNYENQCDSDDEKIFDILDNYFTECDPLSMAEDMFW HVRSYMLRDGFFPTNDTQINFYKDMMLKSNMTNE >Mature_193_residues SLNPFDVKINEKFCEINKSDSKSNLLKEIRDKVYLIQPYDNYALTFYHNTLYYFTANSKRYIVFGHDLEGHFAIEEKSRK IYHISNGKNDQCSYSLIFCNTNINHFISFNNIFIFMVLEQAKILNYENQCDSDDEKIFDILDNYFTECDPLSMAEDMFWH VRSYMLRDGFFPTNDTQINFYKDMMLKSNMTNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23222; Mature: 23091
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNPFDVKINEKFCEINKSDSKSNLLKEIRDKVYLIQPYDNYALTFYHNTLYYFTANSK CCCCCEEEEECCCEEECCCCCCHHHHHHHHHCCEEEEECCCCEEEEEEEEEEEEEEECCC RYIVFGHDLEGHFAIEEKSRKIYHISNGKNDQCSYSLIFCNTNINHFISFNNIFIFMVLE EEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEECCEEEEEEEE QAKILNYENQCDSDDEKIFDILDNYFTECDPLSMAEDMFWHVRSYMLRDGFFPTNDTQIN HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE FYKDMMLKSNMTNE HHHHHHHHCCCCCC >Mature Secondary Structure SLNPFDVKINEKFCEINKSDSKSNLLKEIRDKVYLIQPYDNYALTFYHNTLYYFTANSK CCCCEEEEECCCEEECCCCCCHHHHHHHHHCCEEEEECCCCEEEEEEEEEEEEEEECCC RYIVFGHDLEGHFAIEEKSRKIYHISNGKNDQCSYSLIFCNTNINHFISFNNIFIFMVLE EEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEECCEEEEEEEE QAKILNYENQCDSDDEKIFDILDNYFTECDPLSMAEDMFWHVRSYMLRDGFFPTNDTQIN HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE FYKDMMLKSNMTNE HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA