Click here to switch to the map view.

The map label for this gene is ydcY [H]

Identifier: 218548810

GI number: 218548810

Start: 1491480

End: 1491713

Strand: Direct

Name: ydcY [H]

Synonym: EFER_1449

Alternate gene names: 218548810

Gene position: 1491480-1491713 (Clockwise)

Preceding gene: 218548804

Following gene: 218548813

Centisome position: 32.5

GC content: 48.72

Gene sequence:

>234_bases
ATGACACATCTCGATGACGTAATTGCACGGGTAGATGCTGCGATTAATGAAAGCGTTATTGCACATATGAATGAACTACT
GATTGAGCTTAGCGATGATGCTGAACTCAGTCGGGAAGATCGCTATACCCAGCAGCAGCGTCTGCGCACAGCGATCGCCC
ATCATGGTCGCAAACATAAAGAAGATATGGAGGCGCGCCACGAACAGTTAACCAAAGGCGGCACTATCCTCTGA

Upstream 100 bases:

>100_bases
TGTAACGAAAGAGGAAAGCCGGGAAGAAGCTTGACGCCACATTTCAGGCTCTTATTATCGCCACAGGCTATGATTAATTT
GCTGAATTAAAGGAGAGAAA

Downstream 100 bases:

>100_bases
TTAAAATGAGCGTCTGGCCACCAGCCAGGCGCCAACCACAAGTAAAATTGCGCCACAAATTGGGCCGATTAACGCCCGTA
GTGGTACGCCCTGACTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MTHLDDVIARVDAAINESVIAHMNELLIELSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL

Sequences:

>Translated_77_residues
MTHLDDVIARVDAAINESVIAHMNELLIELSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL
>Mature_76_residues
THLDDVIARVDAAINESVIAHMNELLIELSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787717, Length=77, Percent_Identity=94.8051948051948, Blast_Score=146, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019671 [H]

Pfam domain/function: PF10735 DUF2526 [H]

EC number: NA

Molecular weight: Translated: 8843; Mature: 8712

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLDDVIARVDAAINESVIAHMNELLIELSDDAELSREDRYTQQQRLRTAIAHHGRKHK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
EDMEARHEQLTKGGTIL
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
THLDDVIARVDAAINESVIAHMNELLIELSDDAELSREDRYTQQQRLRTAIAHHGRKHK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
EDMEARHEQLTKGGTIL
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]