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The map label for this gene is ydgK [H]

Identifier: 218548778

GI number: 218548778

Start: 1456207

End: 1456647

Strand: Reverse

Name: ydgK [H]

Synonym: EFER_1417

Alternate gene names: 218548778

Gene position: 1456647-1456207 (Counterclockwise)

Preceding gene: 218548779

Following gene: 218548777

Centisome position: 31.74

GC content: 48.3

Gene sequence:

>441_bases
ATGACCTCAACACCGGCACAACGTATCGGCGGCTGGTTGCTTGCACCATTAGCCTGGCTCTTAGTGGCATTGCTGAGTGT
TTCACTGGCTATGATGCTTTACGCAATGGCTTTGGCGTCACCGCAAACGTTGAAAATGCTGGGCGAACAAGGCTCAACCA
GTCTGGCGTTATGGGCCGCCTCCTTTATTACCGCCATTGGCATGTGGTATTACACATTGTGGTTGACAATCGCTTTCTTT
AAACGCCGTCGATGTGTACCAAAACACTATATTATCTGGCTGCTTATCTCTGTGCTGTTGGCTGTAAAAGCATTTGCCTT
TTCACCAGCTGCTGACTCTTTGGTTGTACGTCAGTTACTGTTTTCACTACTTGCGACGGCTTTATTCGTCCCCTATTTCA
AACGCTCGGCTCGTGTTACAGCAACGTTTGTGAACCCGTAA

Upstream 100 bases:

>100_bases
GTGCAATAATAAAGAAAGTAGCGATCATCATTGAAAGCGATATAATAATCGGCTCAAATGATTTGGTACGCCTGTTAGCT
TTAGCACATCCGGAGAAATT

Downstream 100 bases:

>100_bases
TAACCTTACAGTTAACCTGTTGTCGCCTGATGTGGATTAACGGATAATAGGCGGCTTTTTTATTTCAGGCCGAAAAATGA
CTGATTACTTGCTACTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTSTPAQRIGGWLLAPLAWLLVALLSVSLAMMLYAMALASPQTLKMLGEQGSTSLALWAASFITAIGMWYYTLWLTIAFF
KRRRCVPKHYIIWLLISVLLAVKAFAFSPAADSLVVRQLLFSLLATALFVPYFKRSARVTATFVNP

Sequences:

>Translated_146_residues
MTSTPAQRIGGWLLAPLAWLLVALLSVSLAMMLYAMALASPQTLKMLGEQGSTSLALWAASFITAIGMWYYTLWLTIAFF
KRRRCVPKHYIIWLLISVLLAVKAFAFSPAADSLVVRQLLFSLLATALFVPYFKRSARVTATFVNP
>Mature_145_residues
TSTPAQRIGGWLLAPLAWLLVALLSVSLAMMLYAMALASPQTLKMLGEQGSTSLALWAASFITAIGMWYYTLWLTIAFFK
RRRCVPKHYIIWLLISVLLAVKAFAFSPAADSLVVRQLLFSLLATALFVPYFKRSARVTATFVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=146, Percent_Identity=77.3972602739726, Blast_Score=188, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 16219; Mature: 16088

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPAQRIGGWLLAPLAWLLVALLSVSLAMMLYAMALASPQTLKMLGEQGSTSLALWAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH
SFITAIGMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPAADSLVVRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FSLLATALFVPYFKRSARVTATFVNP
HHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
TSTPAQRIGGWLLAPLAWLLVALLSVSLAMMLYAMALASPQTLKMLGEQGSTSLALWAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH
SFITAIGMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPAADSLVVRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FSLLATALFVPYFKRSARVTATFVNP
HHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]