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The map label for this gene is ydjR [H]

Identifier: 218548689

GI number: 218548689

Start: 1362549

End: 1363139

Strand: Direct

Name: ydjR [H]

Synonym: EFER_1325

Alternate gene names: 218548689

Gene position: 1362549-1363139 (Clockwise)

Preceding gene: 218548688

Following gene: 218548692

Centisome position: 29.69

GC content: 47.88

Gene sequence:

>591_bases
GTGTCGGGAGTGATGATGGAATACTTTGATATCCGCAAAATGCCAGTCAATCTATGGCGTAATGGCGCAGGGGAAACTCG
TGAGATTTGTTGCTTCCCACCCGCTACCCGTGATTTTCACTGGCGAGCAAGCATTGCTTCCATTGCCACGAACGGTGAGT
TTGCGCGTTTTCCTGGAATGGAAAGGGTGGTGACACTGTTAGAAGGAGGGGAAATACACCTTGAAAGTACTGACAGTTTC
AGCCACACCTTGAAACAGTTGCAACCTTTTGCTTTTTCCGGTGAGCAGATAGTGAAAGCGCAACTGAACGAAGGGCAGAT
GTCGATGGATTTCAACATCATGACGCGTTGCAATTCCTGCAAGGCAAAAGTCAGAATCGCCGATCGTACCTTTACTACTT
TTGGCTCTCGGGGTGGGGTCGTGTTTGTTATCAGTGGTATCTGGCAACTGGGCGATAAGGTGTTAACCACCGACCAGGGA
GCGTGCTGGTACGATGGTAAACATACTTTGCGACTCCTGCAATCGACAGGGAAATTACTGTTTAGTGAAATTAACTGGCT
TCCTGGTTATTCACCGGATCAAGTTCAATAA

Upstream 100 bases:

>100_bases
GGTGCCTGATGAGCAAAAAATTCTCCACCAGGTCTAAACCAAATCACCCACACTGCCGATAACAAATAACGGTTGCCTGA
ACGATAACAATCAAAAGAGC

Downstream 100 bases:

>100_bases
TGTCATAGTTACCGGAAAGCAGCGGTTTGCAGAGAATTTTATAGCCATCATGATCAAACCCGGCTGGCGTGCGTACTAAT
GTTGTCGCCTCATCCAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSGVMMEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIATNGEFARFPGMERVVTLLEGGEIHLESTDSF
SHTLKQLQPFAFSGEQIVKAQLNEGQMSMDFNIMTRCNSCKAKVRIADRTFTTFGSRGGVVFVISGIWQLGDKVLTTDQG
ACWYDGKHTLRLLQSTGKLLFSEINWLPGYSPDQVQ

Sequences:

>Translated_196_residues
MSGVMMEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIATNGEFARFPGMERVVTLLEGGEIHLESTDSF
SHTLKQLQPFAFSGEQIVKAQLNEGQMSMDFNIMTRCNSCKAKVRIADRTFTTFGSRGGVVFVISGIWQLGDKVLTTDQG
ACWYDGKHTLRLLQSTGKLLFSEINWLPGYSPDQVQ
>Mature_195_residues
SGVMMEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIATNGEFARFPGMERVVTLLEGGEIHLESTDSFS
HTLKQLQPFAFSGEQIVKAQLNEGQMSMDFNIMTRCNSCKAKVRIADRTFTTFGSRGGVVFVISGIWQLGDKVLTTDQGA
CWYDGKHTLRLLQSTGKLLFSEINWLPGYSPDQVQ

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ves family [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=191, Percent_Identity=80.6282722513089, Blast_Score=333, Evalue=5e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 22058; Mature: 21926

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVMMEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIATNGEFARFPGM
CCCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCCHHCCCH
ERVVTLLEGGEIHLESTDSFSHTLKQLQPFAFSGEQIVKAQLNEGQMSMDFNIMTRCNSC
HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECEEEEECCCCC
KAKVRIADRTFTTFGSRGGVVFVISGIWQLGDKVLTTDQGACWYDGKHTLRLLQSTGKLL
EEEEEEECEEEEECCCCCCEEEEEECHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHH
FSEINWLPGYSPDQVQ
HHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SGVMMEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIATNGEFARFPGM
CCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCCHHCCCH
ERVVTLLEGGEIHLESTDSFSHTLKQLQPFAFSGEQIVKAQLNEGQMSMDFNIMTRCNSC
HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECEEEEECCCCC
KAKVRIADRTFTTFGSRGGVVFVISGIWQLGDKVLTTDQGACWYDGKHTLRLLQSTGKLL
EEEEEEECEEEEECCCCCCEEEEEECHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHH
FSEINWLPGYSPDQVQ
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA