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The map label for this gene is selD [H]

Identifier: 218548667

GI number: 218548667

Start: 1339935

End: 1340978

Strand: Direct

Name: selD [H]

Synonym: EFER_1301

Alternate gene names: 218548667

Gene position: 1339935-1340978 (Clockwise)

Preceding gene: 218548666

Following gene: 218548668

Centisome position: 29.2

GC content: 54.6

Gene sequence:

>1044_bases
ATGAGCGAGAACTCGATTCGTTTGACCCAGTACAGTCACGGTGCAGGTTGCGGCTGTAAAATTTCCCCAAAAGTGTTGGA
AACCATCCTCCACAGTGAACAGGCGAAGTTTGTTGATCCGAATTTGCTTGTGGGTAATGAAACCCGCGATGATGCGGCGG
TGTACGATCTGGGCAATGGCACCAGTGTCATCAGCACCACCGACTTCTTTATGCCGATCGTTGATAATCCTTTCGATTTT
GGCCGCATTGCGGCGACTAACGCCATCAGCGATATCTTTGCGATGGGTGGCAAACCGATTATGGCGATTGCGATCCTCGG
CTGGCCGATCAATAAACTTTCCCCGGAAATTGCCCGCGAAGTGACCGAGGGTGGACGCTATGCATGCCGTCAGGCGGGTA
TAGCGCTGGCTGGCGGTCACTCCATCGATGCACCGGAACCGATTTTTGGTCTGGCGGTGACGGGGATCGTACCGACCGAG
AGGGTGAAGAAAAACAGTACTGCACAAGCCGGATGCAAACTGTTCCTGACGAAACCGCTGGGGATAGGCGTTCTCACCAC
AGCCGAGAAAAAATCGCTGCTGAAACCGGAACATCAGGGACTGGCGACGGAAGTGATGTGCCGGATGAATATTGCAGGCG
CGTCCTTTGCCAATATCGAAGGCGTAAAAGCGATGACCGACGTTACTGGTTTTGGTCTGCTGGGCCATTTGAGCGAAATG
TGTCAGGGTGCTGGTGTGCAGGCGCGCGTCGATTATGAGGCGATCCCGAAACTGCCGGGTGTTGAAGAGTATATTAAGCT
GGGCGCAGTACCTGGCGGCACCGAACGCAACTTTGCTAGCTATGGTCATCTGATGGGTGAAATGCCGCGTGAAGTGCGCG
ATCTACTGTGCGATCCGCAAACTTCTGGCGGTCTGCTGCTGGCGGTCATGCCGGAAGCAGAAAATGAGGTCAAAGCTACA
GCCGCCGAGTTTGGCATTGAACTGACGGCGATTGGCGAACTAGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCG
TTAA

Upstream 100 bases:

>100_bases
GTCTGGATTCTGAGCAAAGGCTCCAGAATCCGGACACTCTCTCTTACTACATAACGGAATGAGGGTTACCATACCCCGAT
TGCATTGACAGGAGATGTCC

Downstream 100 bases:

>100_bases
GTCGATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAG
GCGATGGCTTTATCGAGTGC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM
CQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKAT
AAEFGIELTAIGELVPARGGRAMVEIR

Sequences:

>Translated_347_residues
MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM
CQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKAT
AAEFGIELTAIGELVPARGGRAMVEIR
>Mature_346_residues
SENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFG
RIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTER
VKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEMC
QGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATA
AEFGIELTAIGELVPARGGRAMVEIR

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=338, Percent_Identity=29.585798816568, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI15011844, Length=354, Percent_Identity=29.6610169491525, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1788062, Length=347, Percent_Identity=100, Blast_Score=708, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17543426, Length=345, Percent_Identity=29.8550724637681, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24653602, Length=265, Percent_Identity=30.188679245283, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24653604, Length=265, Percent_Identity=30.188679245283, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574119, Length=327, Percent_Identity=28.7461773700306, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28574118, Length=267, Percent_Identity=30.3370786516854, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36688; Mature: 36557

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG
CCCCCEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE
CEEEEECCEEHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHH
VTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPL
HHHCCHHHHHHCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM
CCEEEECHHHHHHCCCHHCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQ
HHCCCCEEEECHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCC
TSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARGGRAMVEIR
CCCCEEEEECCCCCCHHHHHHHHHCEEEEEHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
SENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG
CCCCEEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE
CEEEEECCEEHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHH
VTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPL
HHHCCHHHHHHCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM
CCEEEECHHHHHHCCCHHCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQ
HHCCCCEEEECHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCC
TSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARGGRAMVEIR
CCCCEEEEECCCCCCHHHHHHHHHCEEEEEHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA