Click here to switch to the map view.

The map label for this gene is yebE [H]

Identifier: 218548593

GI number: 218548593

Start: 1268750

End: 1269415

Strand: Direct

Name: yebE [H]

Synonym: EFER_1227

Alternate gene names: 218548593

Gene position: 1268750-1269415 (Clockwise)

Preceding gene: 218548592

Following gene: 218548594

Centisome position: 27.65

GC content: 46.4

Gene sequence:

>666_bases
TTGAGAGGCAAAATGGCTAACTGGCTGAATCAATTACAATCTCTGCTTGGGCAAAATGTTTCAAACGCCTCTGGTGTTCA
GGGATTAAGTAAATTACTTGTACCTGGCGCACTAGGCGGTCTGGCAGGTTTGCTTATTGCCAATAAATCATCTCGTAAAT
TACTCAGTAAATATGGTACCAGTGCTCTGCTGGTTGGAGGCGGTGCGGTAGCAGGTACGGTCCTGTGGAATAAGTACAAA
GAGAAAGTGCGAGCTGCCCATCAAAATGAACCTCAATTTGGCAATCAGTCATCACCACTTGATGAACGCACTGAGCGCTT
AATCCTCACCCTGGTGTTTGCTGCGAAAAGCGATGGACATATTGATGCCAAAGAACGTGCTGCGATTGACACTCAGCTAC
GTGAAGCGGGTATTGAAGAGCAGGGAAGAGTTCTCATTGAGCAAGCCATTGAACAGCCGCTTGATCCTCAACGCCTGGCA
AAAGGGATTCGTAACGAGGAAGAGGCACTGGAAATTTACTTCCTTAGCTGCGCGGCAATAGATATCGATCATTTTATGGA
ACGCAGTTACCTGAATGCCTTGGGTGATGCACTGAAGATCCCGCAGGATGTACGTGAAGGGATTGAACATGATTTACAAC
AGCAAAAGAATGCGTTGTCAGGTTAA

Upstream 100 bases:

>100_bases
TTAACTTCCCGTCTCTGCTCATTTCATTTGCGAAACTTTTTCCTCACATACATTTTCTGACGTACCCGTCAGGTATGCTA
TACAAATCCAACATCACTCT

Downstream 100 bases:

>100_bases
CGTCCCATCATAGAGTTGCATGTTTCGCTTGCATCCCGGGTGACTTTTGCCACCCTTATAGGATGTTTCATTCAGAAAGA
ACAATAACATGCTACCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRGKMANWLNQLQSLLGQNVSNASGVQGLSKLLVPGALGGLAGLLIANKSSRKLLSKYGTSALLVGGGAVAGTVLWNKYK
EKVRAAHQNEPQFGNQSSPLDERTERLILTLVFAAKSDGHIDAKERAAIDTQLREAGIEEQGRVLIEQAIEQPLDPQRLA
KGIRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVREGIEHDLQQQKNALSG

Sequences:

>Translated_221_residues
MRGKMANWLNQLQSLLGQNVSNASGVQGLSKLLVPGALGGLAGLLIANKSSRKLLSKYGTSALLVGGGAVAGTVLWNKYK
EKVRAAHQNEPQFGNQSSPLDERTERLILTLVFAAKSDGHIDAKERAAIDTQLREAGIEEQGRVLIEQAIEQPLDPQRLA
KGIRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVREGIEHDLQQQKNALSG
>Mature_221_residues
MRGKMANWLNQLQSLLGQNVSNASGVQGLSKLLVPGALGGLAGLLIANKSSRKLLSKYGTSALLVGGGAVAGTVLWNKYK
EKVRAAHQNEPQFGNQSSPLDERTERLILTLVFAAKSDGHIDAKERAAIDTQLREAGIEEQGRVLIEQAIEQPLDPQRLA
KGIRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVREGIEHDLQQQKNALSG

Specific function: Unknown

COG id: COG2979

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788151, Length=218, Percent_Identity=85.7798165137615, Blast_Score=335, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007486 [H]

Pfam domain/function: PF04391 DUF533 [H]

EC number: NA

Molecular weight: Translated: 24051; Mature: 24051

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKMANWLNQLQSLLGQNVSNASGVQGLSKLLVPGALGGLAGLLIANKSSRKLLSKYGT
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SALLVGGGAVAGTVLWNKYKEKVRAAHQNEPQFGNQSSPLDERTERLILTLVFAAKSDGH
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
IDAKERAAIDTQLREAGIEEQGRVLIEQAIEQPLDPQRLAKGIRNEEEALEIYFLSCAAI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
DIDHFMERSYLNALGDALKIPQDVREGIEHDLQQQKNALSG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGKMANWLNQLQSLLGQNVSNASGVQGLSKLLVPGALGGLAGLLIANKSSRKLLSKYGT
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
SALLVGGGAVAGTVLWNKYKEKVRAAHQNEPQFGNQSSPLDERTERLILTLVFAAKSDGH
CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
IDAKERAAIDTQLREAGIEEQGRVLIEQAIEQPLDPQRLAKGIRNEEEALEIYFLSCAAI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
DIDHFMERSYLNALGDALKIPQDVREGIEHDLQQQKNALSG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]