| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is torA [H]
Identifier: 218548560
GI number: 218548560
Start: 1233710
End: 1236256
Strand: Direct
Name: torA [H]
Synonym: EFER_1192
Alternate gene names: 218548560
Gene position: 1233710-1236256 (Clockwise)
Preceding gene: 218548559
Following gene: 218548561
Centisome position: 26.89
GC content: 54.73
Gene sequence:
>2547_bases ATGAACAATAACGATCTCTTTCAGGCATCACGTCGACGTTTTCTGGCACAACTCGGCGGCTTAACTGTCGCCGGGATGCT GGGGTCGTCATTGTTAACGCCGCGCCGTGCGACTGCGGCGCAAGCGGCGACCGAGGCGGTCACCTCGAAAGAGGGCATTC TGACCGGGTCGCACTGGGGGGCTATCCGCGCGACGGTGAAGGATGGTCGCTTTGTGGCGGCAAAACCATTCGAACTGGAT AAATATCCGTCGAAAATGATCGCCGGATTGCCGGATCACGTACACAATGCGGCGCGTATTCGTTATCCGATGGTACGCGT GGACTGGCTACGTAAGCGCCATCTGAGCGACACATCTCAGCGTGGCGATAACCGGTTCGTGCGCGTGAGCTGGGATGAAG CCCTCGACATGTTCTATGAAGAGCTGGAACGTGTGCAGAAAACGCACGGGCCGAGTGCCTTACTGACCGCCAGTGGTTGG CAGTCGACGGGGATGTTCCATAACGCGTCGGGGATGTTGGCGAAAGCGATTGCCTTACATGGTAATAGCGTTGGTACGGG TGGGGATTACTCCACCGGTGCTGCGCAGGTGATCCTGCCGCGTGTAGTTGGCTCAATGGAAGTGTATGAACAGCAAACCT CCTGGCCGCTGGTATTGCAGAACAGCAAAACCATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGCGAACTGG TGGTGCCCGGATCACGATGTTTATGAATATTACGCGCAGTTGAAAGCGAAAGTCGCCGCCGGTGAAATTCAGGTCATCAG CATCGATCCGGTTGTTACATCCACTCATGAGTATCTGGGACGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTG ACGTGCCGCTGCAACTGGCGCTGGCGCATACGTTGTACAGCGAAAACCTGTACGACAAAAACTTCCTCGCTAACTACTGT GTGGGTTTTGAGCAGTTCCTGCCCTATCTGCTGGGCGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCTGAAAAACT GACTGGCATTGATGCCGAAACCATTCGTGGACTGGCGCGGCAGATGGCGGCGAACAGAACGCAGATTATTGCTGGTTGGT GCGTACAGCGTATGCAGCACGGTGAACAGTGGGCGTGGATGATTGTGGTTCTGGCGGCGATGCTGGGGCAAATTGGCCTG CCGGGTGGTGGCTTCGGTTTTGGCTGGCACTATAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTT CTCCGGCTCTACGTCGATTCCACCTGTTCACGACAACAGCGACTACCAAGGCTATAGCAGCACTATTCCGATTGCCCGTT TTGTCGATGCGATCCTCGAACCGGGAAAAGTGATCAACTGGAATGGTAAATCGGTAAAACTGCCACCGCTGAAAATGTGT ATTTTTGCCGGAACTAACCCGTTACATCGTCATCAGCAGATTAACCGCATTATCGAAGGCTGGCGCAAGCTGGAAACGGT TATCGCTATAGATAATCAGTGGACCTCAACCTGCCGCTTTGCCGATATCGTACTGCCTGCGACCACGCAGTTTGAGCGTA ACGATCTCGACCAGTACGGTAACCACTCTAACCGTGGGATCATCGCCATGAAACAGGTGGTGCCGCCGCAGTTTGAGGCG CGCAACGACTTTGATATTTTCCGCGAGCTGTGCCGTCGCTTTAATCGTGAAGAAGCCTTTACCGAAGGGCTGGACGAAAT GGGCTGGCTGAAACGCATCTGGCAGGAAGGTGTACAACAGGGCAAAGGACGCGGTGTTCATCTACCAGCGTTTGATGACT TCTGGAATAAGAAAGAGTACGTCGAGTTTGACCATCCGCAGATGTTTGTTCGCCACCAGGCATTCCGCGAAGATCCGGAT CTCGAACCGCTGGGCACGCCGAGTGGCCTGATTGAGATCTACTCAAAAACCATCGCCGATATGAACTACGACGATTGTCA GGGGCATCCGATGTGGTTTGAGAAAATCGAACGCTCCCACGGTGGGCCCGGCTCGCAGAAGTATCCGTTGCATCTGCAAT CTGTGCATCCGGATTTCCGACTTCACTCGCAGTTATGTGAGTCGGAAACTTTGCGTCAGCAATATACGGTTGCGGGTAAA GAGCCAGTATTTATTAGCCCGCAGGATGCCAGTGCGCGCGGTATTCGTAACGGTGATGTGGTGCGCGTCTTTAACGCTCG TGGTCAGGTGTTGGCTGGAGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACG ATCCAGATAAAGGCGGTGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACTATCGACATCGGTACTTCG CAGCTGGCGCAGGCGACCAGTGCGCATACCACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGC GTTTAATGGCCCCGTTGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGA
Upstream 100 bases:
>100_bases GCCTCGATAAACGTGAAGAACGCACCTTGCTGAAATATCTGCAAATGAATGCGTCTGATACCGCAGGTAAGGCTCACGGC GATAAGAAGGAAGAAAAATA
Downstream 100 bases:
>100_bases CCACGCTGACAGCACAACAGATTGCCTGTGTCTACGCCTGGCTGGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAA CTGACGCAGATCGCCAGTGC
Product: trimethylamine N-oxide (TMAO) reductase I, catalytic subunit
Products: NA
Alternate protein names: TMAO reductase 1; Trimethylamine oxidase 1 [H]
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGSSLLTPRRATAAQAATEAVTSKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYAQLKAKVAAGEIQVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYC VGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPLHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNKKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFISPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
Sequences:
>Translated_848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGSSLLTPRRATAAQAATEAVTSKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYAQLKAKVAAGEIQVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYC VGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPLHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNKKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFISPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS >Mature_848_residues MNNNDLFQASRRRFLAQLGGLTVAGMLGSSLLTPRRATAAQAATEAVTSKEGILTGSHWGAIRATVKDGRFVAAKPFELD KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYAQLKAKVAAGEIQVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYC VGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGL PGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPLHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEA RNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNKKEYVEFDHPQMFVRHQAFREDPD LEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFISPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTS QLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787231, Length=848, Percent_Identity=98.8207547169811, Blast_Score=1753, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=828, Percent_Identity=44.3236714975845, Blast_Score=669, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=791, Percent_Identity=42.8571428571429, Blast_Score=617, Evalue=1e-177, Organism=Escherichia coli, GI87081797, Length=760, Percent_Identity=31.9736842105263, Blast_Score=302, Evalue=6e-83, Organism=Escherichia coli, GI1787870, Length=865, Percent_Identity=29.1329479768786, Blast_Score=273, Evalue=3e-74, Organism=Escherichia coli, GI171474008, Length=850, Percent_Identity=28.9411764705882, Blast_Score=258, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 - InterPro: IPR011887 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 94460; Mature: 94460
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNDLFQASRRRFLAQLGGLTVAGMLGSSLLTPRRATAAQAATEAVTSKEGILTGSHWG CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCC AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ EEEEEECCCEEEEECCCCCCCCHHHHHHCCCHHHCCHHHHCCCHHHHHHHHHHHCCCHHH RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHC GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHCCCCCCC WCPDHDVYEYYAQLKAKVAAGEIQVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA CCCCCHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCHHHH LAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLAR HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHH QMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC GVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMC CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEECCHHEEE IFAGTNPLHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG EEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHC NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHH GKGRGVHLPAFDDFWNKKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD CCCCEEECCCCHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EPVFISPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE CCEEECCCCCCCCCCCCCCEEEEECCCCCEEECHHHHCCCCCCHHHHCCCCCCCCCCCCC PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY CCCEEECCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHHHCCC VPASQVKS CCHHHCCC >Mature Secondary Structure MNNNDLFQASRRRFLAQLGGLTVAGMLGSSLLTPRRATAAQAATEAVTSKEGILTGSHWG CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCC AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ EEEEEECCCEEEEECCCCCCCCHHHHHHCCCHHHCCHHHHCCCHHHHHHHHHHHCCCHHH RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHC GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECHHHHCCCCCCC WCPDHDVYEYYAQLKAKVAAGEIQVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA CCCCCHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCHHHH LAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLAR HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHH QMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC GVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMC CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEECCHHEEE IFAGTNPLHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG EEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHC NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHH GKGRGVHLPAFDDFWNKKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD CCCCEEECCCCHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EPVFISPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE CCEEECCCCCCCCCCCCCCEEEEECCCCCEEECHHHHCCCCCCHHHHCCCCCCCCCCCCC PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY CCCEEECCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCHHHHHHCCC VPASQVKS CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]