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The map label for this gene is yedO [H]

Identifier: 218548544

GI number: 218548544

Start: 1215039

End: 1216025

Strand: Direct

Name: yedO [H]

Synonym: EFER_1175

Alternate gene names: 218548544

Gene position: 1215039-1216025 (Clockwise)

Preceding gene: 218548543

Following gene: 218548545

Centisome position: 26.48

GC content: 53.09

Gene sequence:

>987_bases
ATGTCACTGCAAAACTTAACGCGTTTCCCGCGTCTGGAATTTATTGGCGCACCAACGCCTCTTGAATATCTGCCGCGTTT
TTCTGATTACCTCGGTCGTGAAATATTTATAAAACGTGATGATGTGACGCCGCTGGCAATGGGCGGCAATAAAGTCCGCA
AACTGGAATTCCTTGCCGCCGATGCGCTGCGGGAAGGTGCTGATACTCTGGTAACGGCAGGGGCAATTCAGTCAAATCAT
GTGCGCCAGACAGCCGCTGTGGCGGCAAAACTGGGCTTGCATTGTGTCGCTTTACTGGAAAATCCCATCGGTACGCAGGC
AGAAAACTATCTCAGTAATGGCAATCGACTATTGCTGGATTTATTCAACGTTCAGGTGGAGATGTGCGCAGCACTCGATG
ATCCAGATGCACAATTACAGGAGCTCGCCACGCGCATAGAAGCTCAGGGATTTCGTCCGTATGTTATTCCGGTCGGCGGT
TCAAATGCGCTGGGGGCGCTGGGCTATGTCGAAAGCGCGCTGGAGATCGCACAACAGTGCGAAGGTGCGGTTAATCTTTC
TTCGGTGGTGGTGGCTTCCGGTAGCGCGGGTACACATGCCGGGCTGGCGGTAGGGCTGGAACATCTGCTGCCAGAAACTG
AATTGATCGGGGTTACCGTTTCCCGCTCCGTTGCCGACCAAAAACCGAAAGTGGTTGCTTTGCAACAGGCGGTCGCTCGT
GAACTTGAACTGAGTGCAGCGGCAGAAATTACACTCTGGGATGAATACTTTGCACCAGGGTACGGCACGCCGAACGAAGA
GGGGATGGAAGCTGTGAAATTGCTGGCGCGGCTGGAAGGCATTTTGCTTGATCCGGTTTATACCGGCAAAGCGATGGCCG
GGTTGATTGATGGCATCAGCCAGAAACGCTTTAAAGATCAGGGCCCGATTCTGTTTATTCATACTGGTGGGGCGCCTGCG
CTTTTCGCCTATCATCCGCACGTATAA

Upstream 100 bases:

>100_bases
TAAACGACAAAAAAGGCGCTTTAACCGGCGCCTTTTTTATTTAATTCTCAACCGGGTGCATAATAAACAATAACTCACAT
CAATGTTTACCGGAGGCTCC

Downstream 100 bases:

>100_bases
CTTTCGGAACTGCTCATGCAAGAAAGTATTGATTTAGTAATTGAATCCTTGCCATATCTACTCAAAGGTGCGGTCTTTAC
TCTGCAATTAAGTATTGGCG

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAADALREGADTLVTAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLDLFNVQVEMCAALDDPDAQLQELATRIEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNLSSVVVASGSAGTHAGLAVGLEHLLPETELIGVTVSRSVADQKPKVVALQQAVAR
ELELSAAAEITLWDEYFAPGYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDQGPILFIHTGGAPA
LFAYHPHV

Sequences:

>Translated_328_residues
MSLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAADALREGADTLVTAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLDLFNVQVEMCAALDDPDAQLQELATRIEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNLSSVVVASGSAGTHAGLAVGLEHLLPETELIGVTVSRSVADQKPKVVALQQAVAR
ELELSAAAEITLWDEYFAPGYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDQGPILFIHTGGAPA
LFAYHPHV
>Mature_327_residues
SLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAADALREGADTLVTAGAIQSNHV
RQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLDLFNVQVEMCAALDDPDAQLQELATRIEAQGFRPYVIPVGGS
NALGALGYVESALEIAQQCEGAVNLSSVVVASGSAGTHAGLAVGLEHLLPETELIGVTVSRSVADQKPKVVALQQAVARE
LELSAAAEITLWDEYFAPGYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDQGPILFIHTGGAPAL
FAYHPHV

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=328, Percent_Identity=91.4634146341463, Blast_Score=622, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35039; Mature: 34907

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAA
CCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHH
DALREGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLD
HHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEE
LFNVQVEMCAALDDPDAQLQELATRIEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNLSSVVVASGSAGTHAGLAVGLEHLLPETELIGVTVSRSVADQKPKVVALQQAVAR
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHH
ELELSAAAEITLWDEYFAPGYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHHHHEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDQGPILFIHTGGAPALFAYHPHV
HHHHCCCCCEEEEECCCCCEEEEECCCC
>Mature Secondary Structure 
SLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAA
CCHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHH
DALREGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLD
HHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEE
LFNVQVEMCAALDDPDAQLQELATRIEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNLSSVVVASGSAGTHAGLAVGLEHLLPETELIGVTVSRSVADQKPKVVALQQAVAR
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHH
ELELSAAAEITLWDEYFAPGYGTPNEEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHHHHEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDQGPILFIHTGGAPALFAYHPHV
HHHHCCCCCEEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA