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The map label for this gene is ycaO [H]

Identifier: 218548422

GI number: 218548422

Start: 1083315

End: 1085075

Strand: Reverse

Name: ycaO [H]

Synonym: EFER_1050

Alternate gene names: 218548422

Gene position: 1085075-1083315 (Counterclockwise)

Preceding gene: 218548436

Following gene: 218548421

Centisome position: 23.65

GC content: 51.22

Gene sequence:

>1761_bases
ATGACGCAAACATTTATCCCCGGCAAAGATGCCGCTCTGGAAGATTCCATCGCTCGCTTCCAGCAAAAACTTTCAGACCT
CGGTTTTCAGATTGAAGAGGCCTCCTGGCTGAATCCCGTGCCTAACGTCTGGTCTGTACATATTCGTGACAAAGAGTGCG
CACTGTGTTTTACCAACGGTAAAGGCGCAACCAAAAAAGCGGCGCTGGCATCCGCCCTCGGTGAATATTTCGAGCGTCTC
TCAACCAACTACTTTTTTGCTGACTTCTGGCTGGGCGAAACCATCGCCAACGGTCCGTTCGTGCATTATCCCAACGAAAA
ATGGTTCCCACTGACCGAAAACGACGATGTGCCGGAAGGACTGCTCGATGACCGTCTGCGCGCGTTTTACGACCCTGAAA
ATGAACTGACCGGCAGCATGCTGATTGACCTGCAATCCGGTAACGAAGATCGTGGTATTTGCGGTCTGCCATTTACGCGC
CAGTCCGACAATCAGACCGTTTATATTCCGATGAATATCATTGGTAACTTGTACGTTTCTAACGGTATGTCCGCTGGCAA
TACCCGCAACGAAGCACGCGTTCAAGGGTTGTCCGAAGTTTTCGAACGCTACGTGAAAAACCGCATTATTGCTGAAAGCA
TCAGCTTGCCGGAAATCCCGGCAGACGTGCTGGCACGTTACCCTGCAGTAGTTGAAGCAATCGAAACACTGGAAGCGGAA
GGTTTCCCAATCTTTGCTTATGATGGTTCGCTTGGCGGCCAGTATCCAGTGATTTGCGTGGTACTGTTCAATCCGGCTAA
CGGCACTTGCTTTGCCTCTTTCGGTGCGCATCCTGATTTTGGCGTAGCACTGGAACGTACCGTGACCGAGCTGCTGCAAG
GTCGTGGCCTGAAAGATTTGGATGTGTTTACTCCGCCAACCTTCGATGATGAAGAAGTTGCTGAACATACCAACCTTGAA
ACGCACTTTATCGATTCCAGCGGTTTAATCTCCTGGGACCTGTTCAAGCAGGATGCCGATTATCCGTTTGTGGACTGGAA
TTTCTCCGGCACCACGGAAGAAGAGTTTGCCACGCTGATGGCTATCTTCAACAACGAAGATAAAGAAGTTTATATTGCCG
ATTACGAGCATCTGGGCGTTTATGCTTGTCGTATTATCGTGCCTGGCATGTCCGATATTTATCCGGCTGAAGATTTGTGG
TTAGCGAATAACAGCATGGGCAGCCATTTACGTGAAACGATTCTTTCACTCCCAGGCAGCGAGTGGGAAAAAGAAGATTA
CCTGAACCTCATCGAGCAACTGGATGAAGAAGGTTTTGATGACTTTACCCGCGTGCGTGAGCTATTGGGTCTGGCAACCG
GGCCGGATAACGGCTGGTACACTCTGCGTATCGGTGAATTAAAGGCTATGCTGGCGCTGGCTGGTGGCGATCTGGAACAG
GCTCTGGTCTGGACCGAATGGACGATGGAGTTTAACTCATCGGTCTTCAGCCCGGAACGCGCAAACTATTATCGCTGCCT
GCAAACCCTCCTGCTGCTGGCTCAGGAAGAAGATCGCCAGCCACTGCAATATCTGAATGCTTTTATCCGCATGTACGGCG
CGGAGGCGGTAGAAGCCGCCAGTGCGGCAATGAGTGGCGAAGCGGCGTTTTACGGCCTGCAACCGGTAGATAGCGATCTG
CACGCATTCGCCGCACATCAGTCGCTGCTGAAGGCCTATGAAAAGCTGCAACGCGCCAAAGCGACATTCTGGACAAAATG
A

Upstream 100 bases:

>100_bases
AAAAGCATAGTCAACAGTTCATCGGCATGGCGGCGGTGATAGCGCCTTTGAGATAAAACCCGTATTATTGCGCGCTTTCC
GTACGACTAAAGTGATTTTC

Downstream 100 bases:

>100_bases
AAGCAAACAGACAACGGCGAGTAGGTTAATTTCCTTGTCTGAGCTATATTACGGGGCGCATTTTGTGCCCCTTTCTTGTT
TATTAAATTTAAACAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAASAAMSGEAAFYGLQPVDSDL
HAFAAHQSLLKAYEKLQRAKATFWTK

Sequences:

>Translated_586_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAASAAMSGEAAFYGLQPVDSDL
HAFAAHQSLLKAYEKLQRAKATFWTK
>Mature_585_residues
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLS
TNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQ
SDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEG
FPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLET
HFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWL
ANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQA
LVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAASAAMSGEAAFYGLQPVDSDLH
AFAAHQSLLKAYEKLQRAKATFWTK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=98.9761092150171, Blast_Score=1201, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65736; Mature: 65605

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCCCCCCCCCCCCCH
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHHHHH
AIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHH
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKATFWTK
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCCCCCCCCCCCCCH
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCEEECCCCCCCHHHHHHHH
AIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHH
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKATFWTK
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]