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The map label for this gene is atoE [H]

Identifier: 218548317

GI number: 218548317

Start: 959313

End: 960635

Strand: Reverse

Name: atoE [H]

Synonym: EFER_0936

Alternate gene names: 218548317

Gene position: 960635-959313 (Counterclockwise)

Preceding gene: 218548318

Following gene: 218548316

Centisome position: 20.93

GC content: 53.29

Gene sequence:

>1323_bases
ATGATCGGTCGCATATCGCGTTTTATGACGCGCTTTGTCAGTCGCTGGCTTCCCGATCCTCTGATCTTCGCCATGCTACT
GACATTAATCACCTTTGCCGTAGCCCTCTGGTTAACGCCACAAACCCCTCTCAGCATGGTGAAACTATGGGGTGACGGCT
TCTGGAATCTGCTGGCATTCGGGATGCAGATGGCGCTCATCATCGTGACCGGACATGCACTCGCCAGTTCAGGTCCGGTG
AAAAGTTTGTTACGTACTGCGGCATCAGCAGCCAAAACGCCTACCCAAGGGGTAATGCTGGTCACCTTTTTTGGTTCCGT
CGCCTGCGTAATCAACTGGGGATTCGGTCTGGTGGTTGGCGCAATGTTTGCCCGCGAAGTTGCACGTCGGGTACCTGGCT
CCGACTATCCGTTGTTGATCGCTTGCGCCTATATCGGCTTTCTCACCTGGGGCGGTGGTTTTTCCGGCTCAATGCCGCTA
CTGGCAGCAACACCGGGGAATCCCGTTGAGCATGTCGCTGGGTTAATTCCGGTCAGTGATACCCTGTTTACTGGCTACAA
CATCTTTATCACCCTGGCCCTGATTGTGGTGATGCCGTTTATCACCCGCATGATGACGCCTAAGCCTTCCGACGTGGTGA
GTATCGATCCGAAGCTGTTGTTGGAAGAAGCGGATTTCCAGAAGAAGCTCCCTGCAGACGCCCCACCTTCAGAGAAACTG
GAAGAAAGTCGCATCCTGGCGTTGATTATTGGTGCTCTGGGCATTGCTTATCTGGTGCTGTACTTCTCCGGGAAGGGATT
CAACATCACCATCAACACCGTCAACCTGATGTTTATGATTGCCGGTCTGTTGTTGCATAAAACGCCGATGGCCTATATGC
GGGCGGTAAGTGCGGCTGCGCGCAGTACCGCCGGGATTCTGGTGCAATTCCCCTTCTATGCCGGGATCCAGTTAATGATG
GAACACTCTGGCCTCGGTGGCCTGATCACCGAATTTTTCATCAATGTCGCCAACAAAGATACCTTCCCGCTGATGACCTT
TTTTAGCTCTGCGCTAATTAACTTCGCCGTGCCTTCTGGCGGTGGACACTGGGTTATTCAGGGACCATTCGTCCTTCCTG
CTGCGCAGGCGTTAGGGGCCGATCTGGGTAAATCAGTAATGGCGATAGCTTACGGTGAACAGTGGATGAATATGGCACAA
CCGTTCTGGGCGCTGCCTGCACTGGCAATCGCTGGACTCGGTGTCCGCGACATCATGGGCTATTGCATTACTGCCCTGCT
CTTCTCCGGTGTCATTTTCATTATTGGTTTAACGCTGTTCTGA

Upstream 100 bases:

>100_bases
TCACTGAAATTGCCGAAGGTTGTGATTTAGAAACTGTGCGTGCCAAAACTGAAGCACAGTTCGCCGTCGCTGATGATCTT
CTGCTCCCACAGGGGGCGCT

Downstream 100 bases:

>100_bases
CGGCAACTTTATAAAAGGAAGAAAAATGAAAAATTGTGTCATCGTCAGTGCGGTACGTACTGCCATCGGTAGCTTTAACG
GTTCACTAGCCTCCACCAGC

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLITFAVALWLTPQTPLSMVKLWGDGFWNLLAFGMQMALIIVTGHALASSGPV
KSLLRTAASAAKTPTQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGYNIFITLALIVVMPFITRMMTPKPSDVVSIDPKLLLEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLVLYFSGKGFNITINTVNLMFMIAGLLLHKTPMAYMRAVSAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFIIGLTLF

Sequences:

>Translated_440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLITFAVALWLTPQTPLSMVKLWGDGFWNLLAFGMQMALIIVTGHALASSGPV
KSLLRTAASAAKTPTQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGYNIFITLALIVVMPFITRMMTPKPSDVVSIDPKLLLEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLVLYFSGKGFNITINTVNLMFMIAGLLLHKTPMAYMRAVSAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFIIGLTLF
>Mature_440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLITFAVALWLTPQTPLSMVKLWGDGFWNLLAFGMQMALIIVTGHALASSGPV
KSLLRTAASAAKTPTQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHVAGLIPVSDTLFTGYNIFITLALIVVMPFITRMMTPKPSDVVSIDPKLLLEEADFQKKLPADAPPSEKL
EESRILALIIGALGIAYLVLYFSGKGFNITINTVNLMFMIAGLLLHKTPMAYMRAVSAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSGGGHWVIQGPFVLPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFIIGLTLF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=94.0909090909091, Blast_Score=842, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47296; Mature: 47296

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRISRFMTRFVSRWLPDPLIFAMLLTLITFAVALWLTPQTPLSMVKLWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
GMQMALIIVTGHALASSGPVKSLLRTAASAAKTPTQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECCHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHVAGLIPVSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCH
TLFTGYNIFITLALIVVMPFITRMMTPKPSDVVSIDPKLLLEEADFQKKLPADAPPSEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCHHHCCCCCCCCHHHH
EESRILALIIGALGIAYLVLYFSGKGFNITINTVNLMFMIAGLLLHKTPMAYMRAVSAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVLPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFIIGLTLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGRISRFMTRFVSRWLPDPLIFAMLLTLITFAVALWLTPQTPLSMVKLWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
GMQMALIIVTGHALASSGPVKSLLRTAASAAKTPTQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECCHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHVAGLIPVSD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHCCCCCH
TLFTGYNIFITLALIVVMPFITRMMTPKPSDVVSIDPKLLLEEADFQKKLPADAPPSEKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCHHHCCCCCCCCHHHH
EESRILALIIGALGIAYLVLYFSGKGFNITINTVNLMFMIAGLLLHKTPMAYMRAVSAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPLMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVLPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFIIGLTLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]