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The map label for this gene is yfbH

Identifier: 218548294

GI number: 218548294

Start: 928353

End: 929255

Strand: Reverse

Name: yfbH

Synonym: EFER_0913

Alternate gene names: 218548294

Gene position: 929255-928353 (Counterclockwise)

Preceding gene: 218548295

Following gene: 218548293

Centisome position: 20.25

GC content: 49.72

Gene sequence:

>903_bases
ATGACTAAAGTGGGCTTACGCATTGATGTCGACACCTTTCGTGGTACCCGCGAAGGCGTGCCACGTCTGCTGGAAACGTT
GGATAAGCATAATATTCAGGCCAGTTTTTTCTTCAGCGTTGGCCCCGATAATATGGGCCGCCATCTATGGCGGCTGGTAA
AACCGCAGTTCCTGTGGAAGATGCTGCGTTCAAACGCAGCTTCGCTTTACGGCTGGGATATTTTACTGGCTGGCACCGCA
TGGGCAGGCAAAGAGATCGGTAAAGCCAATGCTGCCATTATCCGCGAGGCAGCTAAACATCATGAAATTGGGCTACACGC
CTGGGATCACCATGCCTGGCAGACCCATAGTGGTAATTGGGATCAGCAAACTCTGGTTAATGACATTGCACGTGGCCTTC
GGGTACTGGAAGAAATTATTGGTCAACCCGTGTCCTGTTCCGCAGTTGCTGGCTGGCGTGCAGACCAACAGGTCGTGGAG
GCAAAAGAGTTCTTTCATTTGCGCTATAACAGTGATTGCAGAGGAACAATGCCATTTCGTCCACAACTGGAATCCGGTAA
ATCAGGAACACCGCAAATCCCGGTTACCTTACCAACCTGGGATGAAGTGGTTGGTCGGGAAGTAAAAACAGCAGATTTCA
ATGGCTGGCTTCTTAATCGTATTCTGCGAGATAGAGGTACGCCTGTTTATACCATTCACGCTGAAGTCGAAGGCTGTGCT
TACCATCTTGATTTTGTTGATCTCCTGAAACGCGCAGCCCGTGAAGGTATTACATTTTGCCCTTTAAGTGAGCTATTACC
CGCAACGCAAGACGCTTTACCCTTGGGGGAAATTGTACGAGGACATATTGCCGGGCGTGAAGGCTGGCTTGGTTGCCAAC
AATGCGTGAGTTTAAGTCAATGA

Upstream 100 bases:

>100_bases
GCCGCTGCCTTGACTGGGAGCCAACCATCGATATGCAGGAAACCATTGACGAAACGCTGGATTTCTTCCTGCGCACAGTA
GATATCGTGGAAAAATCGTC

Downstream 100 bases:

>100_bases
AATCGGCACGTTACATACTGGCCTTTATCGCGTTCATCGCACTCTATTATTTTTTACCCATGAACACCCGTCTGCTATGG
CAACCTGATGAAACGCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTKVGLRIDVDTFRGTREGVPRLLETLDKHNIQASFFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTA
WAGKEIGKANAAIIREAAKHHEIGLHAWDHHAWQTHSGNWDQQTLVNDIARGLRVLEEIIGQPVSCSAVAGWRADQQVVE
AKEFFHLRYNSDCRGTMPFRPQLESGKSGTPQIPVTLPTWDEVVGREVKTADFNGWLLNRILRDRGTPVYTIHAEVEGCA
YHLDFVDLLKRAAREGITFCPLSELLPATQDALPLGEIVRGHIAGREGWLGCQQCVSLSQ

Sequences:

>Translated_300_residues
MTKVGLRIDVDTFRGTREGVPRLLETLDKHNIQASFFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTA
WAGKEIGKANAAIIREAAKHHEIGLHAWDHHAWQTHSGNWDQQTLVNDIARGLRVLEEIIGQPVSCSAVAGWRADQQVVE
AKEFFHLRYNSDCRGTMPFRPQLESGKSGTPQIPVTLPTWDEVVGREVKTADFNGWLLNRILRDRGTPVYTIHAEVEGCA
YHLDFVDLLKRAAREGITFCPLSELLPATQDALPLGEIVRGHIAGREGWLGCQQCVSLSQ
>Mature_299_residues
TKVGLRIDVDTFRGTREGVPRLLETLDKHNIQASFFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAW
AGKEIGKANAAIIREAAKHHEIGLHAWDHHAWQTHSGNWDQQTLVNDIARGLRVLEEIIGQPVSCSAVAGWRADQQVVEA
KEFFHLRYNSDCRGTMPFRPQLESGKSGTPQIPVTLPTWDEVVGREVKTADFNGWLLNRILRDRGTPVYTIHAEVEGCAY
HLDFVDLLKRAAREGITFCPLSELLPATQDALPLGEIVRGHIAGREGWLGCQQCVSLSQ

Specific function: Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial p

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily

Homologues:

Organism=Escherichia coli, GI1788590, Length=294, Percent_Identity=85.7142857142857, Blast_Score=529, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARND_ESCF3 (B7LM75)

Other databases:

- EMBL:   CU928158
- RefSeq:   YP_002382085.1
- EnsemblBacteria:   EBESCT00000123379
- GeneID:   7123715
- GenomeReviews:   CU928158_GR
- KEGG:   efe:EFER_0913
- GeneTree:   EBGT00050000011849
- HOGENOM:   HBG298639
- ProtClustDB:   PRK15394
- BioCyc:   EFER585054:EFER_0913-MONOMER
- HAMAP:   MF_01870
- InterPro:   IPR011330
- InterPro:   IPR002509
- Gene3D:   G3DSA:3.20.20.370

Pfam domain/function: PF01522 Polysacc_deac_1; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 33662; Mature: 33531

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVGLRIDVDTFRGTREGVPRLLETLDKHNIQASFFFSVGPDNMGRHLWRLVKPQFLWK
CCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCHHHHHH
MLRSNAASLYGWDILLAGTAWAGKEIGKANAAIIREAAKHHEIGLHAWDHHAWQTHSGNW
HHHCCCCHHCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC
DQQTLVNDIARGLRVLEEIIGQPVSCSAVAGWRADQQVVEAKEFFHLRYNSDCRGTMPFR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCCCC
PQLESGKSGTPQIPVTLPTWDEVVGREVKTADFNGWLLNRILRDRGTPVYTIHAEVEGCA
CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEE
YHLDFVDLLKRAAREGITFCPLSELLPATQDALPLGEIVRGHIAGREGWLGCQQCVSLSQ
EECHHHHHHHHHHHCCCEECCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
TKVGLRIDVDTFRGTREGVPRLLETLDKHNIQASFFFSVGPDNMGRHLWRLVKPQFLWK
CCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCHHHHHH
MLRSNAASLYGWDILLAGTAWAGKEIGKANAAIIREAAKHHEIGLHAWDHHAWQTHSGNW
HHHCCCCHHCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC
DQQTLVNDIARGLRVLEEIIGQPVSCSAVAGWRADQQVVEAKEFFHLRYNSDCRGTMPFR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCCCC
PQLESGKSGTPQIPVTLPTWDEVVGREVKTADFNGWLLNRILRDRGTPVYTIHAEVEGCA
CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEE
YHLDFVDLLKRAAREGITFCPLSELLPATQDALPLGEIVRGHIAGREGWLGCQQCVSLSQ
EECHHHHHHHHHHHCCCEECCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA