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The map label for this gene is ybaP [H]

Identifier: 218547933

GI number: 218547933

Start: 536858

End: 537652

Strand: Reverse

Name: ybaP [H]

Synonym: EFER_0536

Alternate gene names: 218547933

Gene position: 537652-536858 (Counterclockwise)

Preceding gene: 218547936

Following gene: 218547932

Centisome position: 11.72

GC content: 52.45

Gene sequence:

>795_bases
ATGGATCTGTTATACCGGGTAAAAACGCTTTGGGCCGCGCTGCGCGGTAATCATTACACCTGGCCTGCTATCGATATCTC
TCTTCCCGGCAATTGCCATTTTCATCTGATTGGCAGTATTCATATGGGTAGCCACGATATGGCTCCCCTGCCCACCCGTT
TGCTCAAAAAGCTCAAAAACGCCGATGCGCTGATCGTCGAGGCGGATGTTTCCACCAGCGATACGCCTTTTGCCAATTTG
CCTGCCTGCGAGGCGCTGGAAGAGCGCATTAGCGAGGAGCAATTACAAAATCTGCAAAACATAAGCCAGGAGATGGGCAT
TTCTCCATCGCTCTTTTCCACCCAACCACTGTGGCAAATCGCGATGGTTCTTCAGGCAACGCAAGCGCAAAAACTGGGGC
TGCGGGCAGAATACGGTATCGATTACCAGCTATTGCAGGTGGCGAAGCAACAACATAAACCCGTGATTGAACTGGAAGGG
GCAGAAAACCAGATTGCCATGTTGCTCCAGCTCCCTGACAAAGGACTGGCGCTGCTGGACGATACGCTGACCCACTGGCA
CACCAATGCACGGTTGCTGCAACAAATGATGAGCTGGTGGCTGAATACGCCGCCGCAAAATAATGAAATAACGCTGCCTA
ATACGTTCAGTCAGTCGCTGTACGATGTGTTGATGCATCAGCGAAATCTCGCCTGGCGGGACAAATTACGCGCTATGCCG
CCGGGGCGCTATGTGGTCGCGGTCGGTGCACTACACCTGTATGGAGAAGGGAATTTGCCACAAATGTTGCGCTAA

Upstream 100 bases:

>100_bases
ATTTTAATGCACACAAGCACTGTGCGCAAGTGCAATAATCAACTCCATTTGCGCCATCCCTCCCTGCGCGCTAGCATGAT
ATTTCACAAAGGGAGGTCGT

Downstream 100 bases:

>100_bases
AAAAATGGCCAATATCGCTATTGGCCCGTCAAAGAGGAATTTCATTTTTTTATTATTATGCCGTCACTTTAAGCGACGGT
GTAACTCGATTGTCGCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDLLYRVKTLWAALRGNHYTWPAIDISLPGNCHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANL
PACEALEERISEEQLQNLQNISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQVAKQQHKPVIELEG
AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNTPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP
PGRYVVAVGALHLYGEGNLPQMLR

Sequences:

>Translated_264_residues
MDLLYRVKTLWAALRGNHYTWPAIDISLPGNCHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANL
PACEALEERISEEQLQNLQNISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQVAKQQHKPVIELEG
AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNTPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP
PGRYVVAVGALHLYGEGNLPQMLR
>Mature_264_residues
MDLLYRVKTLWAALRGNHYTWPAIDISLPGNCHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANL
PACEALEERISEEQLQNLQNISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQVAKQQHKPVIELEG
AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNTPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP
PGRYVVAVGALHLYGEGNLPQMLR

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=264, Percent_Identity=97.7272727272727, Blast_Score=530, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 29885; Mature: 29885

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLYRVKTLWAALRGNHYTWPAIDISLPGNCHFHLIGSIHMGSHDMAPLPTRLLKKLKN
CCHHHHHHHHHHHHCCCCEECCEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCC
ADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQNISQEMGISPSLFSTQPLWQI
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AMVLQATQAQKLGLRAEYGIDYQLLQVAKQQHKPVIELEGAENQIAMLLQLPDKGLALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQQMMSWWLNTPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP
HHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQMLR
CCCEEEEEEEEEEECCCCCHHHCC
>Mature Secondary Structure
MDLLYRVKTLWAALRGNHYTWPAIDISLPGNCHFHLIGSIHMGSHDMAPLPTRLLKKLKN
CCHHHHHHHHHHHHCCCCEECCEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCC
ADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQNISQEMGISPSLFSTQPLWQI
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AMVLQATQAQKLGLRAEYGIDYQLLQVAKQQHKPVIELEGAENQIAMLLQLPDKGLALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQQMMSWWLNTPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP
HHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQMLR
CCCEEEEEEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]