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The map label for this gene is xerC [H]

Identifier: 218534740

GI number: 218534740

Start: 14221

End: 15096

Strand: Direct

Name: xerC [H]

Synonym: Mchl_5760

Alternate gene names: 218534740

Gene position: 14221-15096 (Clockwise)

Preceding gene: 218534739

Following gene: 218534742

Centisome position: 62.88

GC content: 69.18

Gene sequence:

>876_bases
ATGTCTACCGCCCTCGTTCCGGTCGAACCGCAACCGGTCGCGATCCCGGCTCAAGCTGACGACGACGAGCACATGCTGCG
GCTGTGGCTCGCCCGATCGTCCAGCCCGAACACCCGGCGTAACTATGAGCGCGAGGCGCGGCGCTTCCTGGCGCACGTCG
GCCGTCCACTCGCGGCCGTGAGGATGGGCGACCTTCAGGAGTACATCGCAGGGCGGCCGGGCTCGTCGGCGACGACGGCG
CTCTCGGCCGCCGCGCTCAAGAGCCTGTTCGCCTTCGCGCAGGAGGCCGGCTATCTGCGCTTCAATGTCGGTGCCGCGGT
GAAGGTGCCGCCGATCAAGAATACGCTCGCGGAGCGCATCATGCCCGAGGGCGACGCGTTGCTGATGATCCGGCAAGAAC
CGGCGCTGCGAAACCGGGTGCTGCTCACGGTGCTCTACGGCGGGGGCCTACGCATCTCGGAAGTGTGCAGCCTACGCTGG
CGGGATCTCGCGCCCCGCGATGAGGCCGGACAGGCGACGGTCTTCGGCAAGGGTGGCAAGACGCGCGTGGTCCTGCTTTC
GGCCGCGACGTGGAAGGTGCTGCAGGCTCTCCGCGAAGAGGCGCTAGCTGATGATCCCGTGTTCCGGTCACGGAAGGGTG
GGGCGCTCGATCCGTCCGCCGTCCATCGCATCGTGAAGGCGGCGGCGGCCCGCGCTGGCCTGCCGGCCGATGTCTCGGCA
CACTGGCTCCGGCACGCGCACGCCTCGCACGCCCTTGACCGCGGCGCCCCGATCCATCTCGTGCAAGCAACGCTCGGCCA
CGCATCTGTGGCGACGACAGGCCGGTATCTCCACGCTCGGCCGTCGGAGAGTTCGGCGCGGTTTTTGGGGGTCTAG

Upstream 100 bases:

>100_bases
TTTGCAGGCTTGCCGGCATACCTGCATTCCGCCATTGCGGCTATCCTCGTTAGCGGCTACGCAAGACAAGAATCGTTATC
TTGCGTTTAAGATTTCAGAC

Downstream 100 bases:

>100_bases
ATGAGCGCCGAGGTAGAGGTCTTCCCGCCCGAATTGGCGGCCTTGGTCGAAGCGATCCAAGGGGCTGTTGGTCCTGCGGC
TATTGCGGCACGAACAAAGG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSTALVPVEPQPVAIPAQADDDEHMLRLWLARSSSPNTRRNYEREARRFLAHVGRPLAAVRMGDLQEYIAGRPGSSATTA
LSAAALKSLFAFAQEAGYLRFNVGAAVKVPPIKNTLAERIMPEGDALLMIRQEPALRNRVLLTVLYGGGLRISEVCSLRW
RDLAPRDEAGQATVFGKGGKTRVVLLSAATWKVLQALREEALADDPVFRSRKGGALDPSAVHRIVKAAAARAGLPADVSA
HWLRHAHASHALDRGAPIHLVQATLGHASVATTGRYLHARPSESSARFLGV

Sequences:

>Translated_291_residues
MSTALVPVEPQPVAIPAQADDDEHMLRLWLARSSSPNTRRNYEREARRFLAHVGRPLAAVRMGDLQEYIAGRPGSSATTA
LSAAALKSLFAFAQEAGYLRFNVGAAVKVPPIKNTLAERIMPEGDALLMIRQEPALRNRVLLTVLYGGGLRISEVCSLRW
RDLAPRDEAGQATVFGKGGKTRVVLLSAATWKVLQALREEALADDPVFRSRKGGALDPSAVHRIVKAAAARAGLPADVSA
HWLRHAHASHALDRGAPIHLVQATLGHASVATTGRYLHARPSESSARFLGV
>Mature_290_residues
STALVPVEPQPVAIPAQADDDEHMLRLWLARSSSPNTRRNYEREARRFLAHVGRPLAAVRMGDLQEYIAGRPGSSATTAL
SAAALKSLFAFAQEAGYLRFNVGAAVKVPPIKNTLAERIMPEGDALLMIRQEPALRNRVLLTVLYGGGLRISEVCSLRWR
DLAPRDEAGQATVFGKGGKTRVVLLSAATWKVLQALREEALADDPVFRSRKGGALDPSAVHRIVKAAAARAGLPADVSAH
WLRHAHASHALDRGAPIHLVQATLGHASVATTGRYLHARPSESSARFLGV

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=270, Percent_Identity=30.7407407407407, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790244, Length=211, Percent_Identity=33.175355450237, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790768, Length=167, Percent_Identity=30.5389221556886, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 31368; Mature: 31237

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALVPVEPQPVAIPAQADDDEHMLRLWLARSSSPNTRRNYEREARRFLAHVGRPLAAV
CCCCEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
RMGDLQEYIAGRPGSSATTALSAAALKSLFAFAQEAGYLRFNVGAAVKVPPIKNTLAERI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCHHHHHHHHH
MPEGDALLMIRQEPALRNRVLLTVLYGGGLRISEVCSLRWRDLAPRDEAGQATVFGKGGK
CCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
TRVVLLSAATWKVLQALREEALADDPVFRSRKGGALDPSAVHRIVKAAAARAGLPADVSA
EEEEEEEHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
HWLRHAHASHALDRGAPIHLVQATLGHASVATTGRYLHARPSESSARFLGV
HHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
STALVPVEPQPVAIPAQADDDEHMLRLWLARSSSPNTRRNYEREARRFLAHVGRPLAAV
CCCEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
RMGDLQEYIAGRPGSSATTALSAAALKSLFAFAQEAGYLRFNVGAAVKVPPIKNTLAERI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCHHHHHHHHH
MPEGDALLMIRQEPALRNRVLLTVLYGGGLRISEVCSLRWRDLAPRDEAGQATVFGKGGK
CCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
TRVVLLSAATWKVLQALREEALADDPVFRSRKGGALDPSAVHRIVKAAAARAGLPADVSA
EEEEEEEHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
HWLRHAHASHALDRGAPIHLVQATLGHASVATTGRYLHARPSESSARFLGV
HHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA