| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is pyrG
Identifier: 218533000
GI number: 218533000
Start: 5489177
End: 5490805
Strand: Reverse
Name: pyrG
Synonym: Mchl_5124
Alternate gene names: 218533000
Gene position: 5490805-5489177 (Counterclockwise)
Preceding gene: 218533001
Following gene: 218532999
Centisome position: 95.03
GC content: 67.46
Gene sequence:
>1629_bases ATGACGCGGTACGTTTTCATCACCGGCGGCGTGGTTTCCTCCCTGGGCAAGGGCCTCGCCTCCGCCGCCCTCGCGGCTTT GCTCCAAGCGCGCGGATACCGCGTGCGCCTGCGCAAGCTCGACCCCTATCTCAACGTCGATCCGGGCACGATGAGCCCGA CGCAGCACGGCGAGGTGTTCGTCACCGACGACGGCGCCGAGACCGACCTGGATCTGGGCCATTACGAGCGCTTCACCGGC CTGCCGGCCTCGCGCGCCGACAATGTGACCACGGGGCGGATCTACCTCGACATCATCACCAAGGAGCGGCGCGGCGATTA TCTCGGCGCCACGATCCAGGTGATTCCGCACGTCACCAACGCCATCAAGGCGTTCGTGCTCGACGGCAATGACGATTACG ACTTCGTTCTGGTCGAGATCGGCGGCACGGTCGGCGACATCGAGGGCCTGCCGTTCTTCGAGGCGATCCGCCAGATCGGC CAGGAGCGCCCGCGCGGCAGCGTCTGCTACCTGCACCTCACGCTGCTGCCCTACATCCCGTCCGCCGGCGAGTTGAAGAC CAAGCCGACGCAGCACTCCGTGAAGGAGCTGCGCTCCATCGGCATCCAGCCCGACATCCTGCTCTGCCGCTGCGACCGTC CGATCCCGCAGGACGAGCGGCGCAAGCTCGGCCTGTTCTGCAACGTGCGGGAAAGCGCCGTCATCGAGGCGCGCGACGTC GACACGATCTACGCTGTGCCGCTCTCCTACCGCGAGGCGGGACTCGACCGGGAGATCCTGGCACATTTCCAGATGGAGCC CGAGACCGAGCCGAAGCTCGACCGCTGGCAGAACATCCTCGAGCGGGTGCGCAACCCCGAGGGCGAGGTCACCATCGCCA TCGTCGGCAAGTATACGGGCCTGAAGGATGCCTACAAGTCGCTCACCGAGGCGCTGACCCACGGTGGTATCGCCAACAAC GTGCGCGTCAACCTTGAATGGATCGAGGCGGAGGTGTTCGAGCGCGAGGACCCGGCGCCCTTCCTCGAAGGGCTGCACGG CATCCTCGTGCCCGGCGGCTTCGGCCAGCGCGGCGCCGAGGGCAAGATCCGCGCGGCCCGCTACGCCCGCGAGCGCAACA TCCCCTATTTCGGCATCTGCTTCGGCATGCAGATGGCGGTGATCGAGGCCGCGCGTTCGCTCGCCGGGATCGAAGGCGCC AACTCTACTGAGTTCGGCGCGACCGCGGAGCCCGTGGTCGGCCTCCTGACCGAGTGGATGCGCGGCAACGAGTTGGAGCG GCGCGCGGCCGAGAGCGATCTCGGCGGCACCATGCGGCTCGGCGCCTACAAGGCGACGCTCGGTGCGGACACCAAGATCG CGCAGATGTACGGCGGCACCGAGATCTCGGAGCGCCACCGGCACCGCTACGAGGTCAACATGGCCTATCGCGCCTGCCTG GAGGCCAAGGGTCTGCGCTTCTCCGGCACCTCGCCGGACGGGCTGCTGCCCGAGACGGTTGAACACGAGGGCCACCCGTG GTTCATCGGCGTGCAATTCCACCCGGAGTTGAAGTCGCGCCCGTTCGAGCCGCACCCGCTGTTCAAGGGGTTCATTGCCG CCGCGATCGACCAGAGCCGGCTGGTGTGA
Upstream 100 bases:
>100_bases ATGAGGGGCATCGCCCCGTGCCGCCTCCCGCGTGGCCGGCGGGGTGCGGCAACCGTTGCGGTTTGGCGAATCGCTTGAGC CCCTTTATGGACCAAAGCCC
Downstream 100 bases:
>100_bases CGTAGGGGAAAGCACGGTTGACGACGATCTCGGGCCTTCCGGCCTTTCTCGCCTACTTCGCCGTCTCCCTCGGGCTCACC GCCCTCTACCTCGTGACCTA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTRYVFITGGVVSSLGKGLASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTG LPASRADNVTTGRIYLDIITKERRGDYLGATIQVIPHVTNAIKAFVLDGNDDYDFVLVEIGGTVGDIEGLPFFEAIRQIG QERPRGSVCYLHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDRPIPQDERRKLGLFCNVRESAVIEARDV DTIYAVPLSYREAGLDREILAHFQMEPETEPKLDRWQNILERVRNPEGEVTIAIVGKYTGLKDAYKSLTEALTHGGIANN VRVNLEWIEAEVFEREDPAPFLEGLHGILVPGGFGQRGAEGKIRAARYARERNIPYFGICFGMQMAVIEAARSLAGIEGA NSTEFGATAEPVVGLLTEWMRGNELERRAAESDLGGTMRLGAYKATLGADTKIAQMYGGTEISERHRHRYEVNMAYRACL EAKGLRFSGTSPDGLLPETVEHEGHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAIDQSRLV
Sequences:
>Translated_542_residues MTRYVFITGGVVSSLGKGLASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTG LPASRADNVTTGRIYLDIITKERRGDYLGATIQVIPHVTNAIKAFVLDGNDDYDFVLVEIGGTVGDIEGLPFFEAIRQIG QERPRGSVCYLHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDRPIPQDERRKLGLFCNVRESAVIEARDV DTIYAVPLSYREAGLDREILAHFQMEPETEPKLDRWQNILERVRNPEGEVTIAIVGKYTGLKDAYKSLTEALTHGGIANN VRVNLEWIEAEVFEREDPAPFLEGLHGILVPGGFGQRGAEGKIRAARYARERNIPYFGICFGMQMAVIEAARSLAGIEGA NSTEFGATAEPVVGLLTEWMRGNELERRAAESDLGGTMRLGAYKATLGADTKIAQMYGGTEISERHRHRYEVNMAYRACL EAKGLRFSGTSPDGLLPETVEHEGHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAIDQSRLV >Mature_541_residues TRYVFITGGVVSSLGKGLASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGL PASRADNVTTGRIYLDIITKERRGDYLGATIQVIPHVTNAIKAFVLDGNDDYDFVLVEIGGTVGDIEGLPFFEAIRQIGQ ERPRGSVCYLHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDRPIPQDERRKLGLFCNVRESAVIEARDVD TIYAVPLSYREAGLDREILAHFQMEPETEPKLDRWQNILERVRNPEGEVTIAIVGKYTGLKDAYKSLTEALTHGGIANNV RVNLEWIEAEVFEREDPAPFLEGLHGILVPGGFGQRGAEGKIRAARYARERNIPYFGICFGMQMAVIEAARSLAGIEGAN STEFGATAEPVVGLLTEWMRGNELERRAAESDLGGTMRLGAYKATLGADTKIAQMYGGTEISERHRHRYEVNMAYRACLE AKGLRFSGTSPDGLLPETVEHEGHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAIDQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=558, Percent_Identity=42.2939068100358, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=42.4460431654676, Blast_Score=457, Evalue=1e-128, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=42.4460431654676, Blast_Score=457, Evalue=1e-128, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=42.4460431654676, Blast_Score=457, Evalue=1e-128, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=58.7686567164179, Blast_Score=612, Evalue=1e-176, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=35.632183908046, Blast_Score=392, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=40.4217926186292, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=39.3298059964727, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=43.75, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357815, Length=506, Percent_Identity=43.4782608695652, Blast_Score=403, Evalue=1e-112,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_METC4 (B7KUU9)
Other databases:
- EMBL: CP001298 - RefSeq: YP_002423816.1 - ProteinModelPortal: B7KUU9 - GeneID: 7118999 - GenomeReviews: CP001298_GR - KEGG: mch:Mchl_5124 - HOGENOM: HBG597806 - OMA: TEWLRGN - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60006; Mature: 59875
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 380-380 ACT_SITE 514-514 ACT_SITE 516-516
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYVFITGGVVSSLGKGLASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGLPASRADNVTTGRIYLDIITKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCEECEEEEEEEECCCCCCCCCHHHHHHHHHHC AIKAFVLDGNDDYDFVLVEIGGTVGDIEGLPFFEAIRQIGQERPRGSVCYLHLTLLPYIP CEEEEEECCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRCDRPIPQDERRKLGLFCNVRESAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCEEEEECCC DTIYAVPLSYREAGLDREILAHFQMEPETEPKLDRWQNILERVRNPEGEVTIAIVGKYTG CEEEEECCCHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC LKDAYKSLTEALTHGGIANNVRVNLEWIEAEVFEREDPAPFLEGLHGILVPGGFGQRGAE HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHCCCCCCHHHHCCCEEEECCCCCCCCCC GKIRAARYARERNIPYFGICFGMQMAVIEAARSLAGIEGANSTEFGATAEPVVGLLTEWM CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH RGNELERRAAESDLGGTMRLGAYKATLGADTKIAQMYGGTEISERHRHRYEVNMAYRACL CCCHHHHHHHHCCCCCEEEECEEEEECCCCCHHHHHHCCCCHHHHHHHHEEEHHHHHHHH EAKGLRFSGTSPDGLLPETVEHEGHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAIDQSR HHCCCEECCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHC LV CC >Mature Secondary Structure TRYVFITGGVVSSLGKGLASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGLPASRADNVTTGRIYLDIITKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCEECEEEEEEEECCCCCCCCCHHHHHHHHHHC AIKAFVLDGNDDYDFVLVEIGGTVGDIEGLPFFEAIRQIGQERPRGSVCYLHLTLLPYIP CEEEEEECCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRCDRPIPQDERRKLGLFCNVRESAVIEARDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCEEEEECCC DTIYAVPLSYREAGLDREILAHFQMEPETEPKLDRWQNILERVRNPEGEVTIAIVGKYTG CEEEEECCCHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC LKDAYKSLTEALTHGGIANNVRVNLEWIEAEVFEREDPAPFLEGLHGILVPGGFGQRGAE HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHCCCCCCHHHHCCCEEEECCCCCCCCCC GKIRAARYARERNIPYFGICFGMQMAVIEAARSLAGIEGANSTEFGATAEPVVGLLTEWM CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH RGNELERRAAESDLGGTMRLGAYKATLGADTKIAQMYGGTEISERHRHRYEVNMAYRACL CCCHHHHHHHHCCCCCEEEECEEEEECCCCCHHHHHHCCCCHHHHHHHHEEEHHHHHHHH EAKGLRFSGTSPDGLLPETVEHEGHPWFIGVQFHPELKSRPFEPHPLFKGFIAAAIDQSR HHCCCEECCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHC LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA