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The map label for this gene is 218532995

Identifier: 218532995

GI number: 218532995

Start: 5485975

End: 5486427

Strand: Reverse

Name: 218532995

Synonym: Mchl_5119

Alternate gene names: NA

Gene position: 5486427-5485975 (Counterclockwise)

Preceding gene: 218532997

Following gene: 218532994

Centisome position: 94.96

GC content: 69.09

Gene sequence:

>453_bases
GTGACCGAAATCCTGTTCTACCACCTCCAGCGCCAGCCCCTCGAAAAGGTGCTGCCCAGCCTCGTCGAGAAGTCGCTGGA
GCGCGGCTGGCAGGCGGCCATCCAGGCGGTGAGCGAGGAGCGGCTTCAGGCGCTCGACGACGGCCTTTGGACCTATACCG
ACGAGAGCTTCCTGCCCCACGGCACGGACCGCGACACGGACGCGGCGAGCCAGCCCGTGGTGCTGACCCTGCGCGAGACC
AACCCCAACGGCGCCTCGATCCGCTTCCTCGTGGAGGGCGCGGAACTGCCGGAGGATGCGGAGAGCTATCAGCGGATCTG
CATCCTGTTCGACGGCACCGACACCGATGCGCTGCTGCACGCCCGCGAGCAATGGCGCGGCGCCAAGGCCGCCGGCCACG
CCATCGCGTACTGGCAGCAGGACGAGGGCGGGCGCTGGACCAAGAAGGCGTGA

Upstream 100 bases:

>100_bases
GCGCGAATTTCCTCAGCCGTCGCGCGATCCGTGGGTCCGGCGGCCGCGACGCCACGTCCGCACTGCCTTCGGGGCAGCAG
ACCCTATATGGTGCGATACC

Downstream 100 bases:

>100_bases
GATCAATGCGTCGTCCGGTGGGAAGGCGCGACAACACGCACGACCAATCGCCCGAGGATCGCGAGAGACCGATGACGCAA
GCCTTCTCCCTCTCCCCCCG

Product: DNA polymerase III chi subunit HolC

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Superfamily; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTEILFYHLQRQPLEKVLPSLVEKSLERGWQAAIQAVSEERLQALDDGLWTYTDESFLPHGTDRDTDAASQPVVLTLRET
NPNGASIRFLVEGAELPEDAESYQRICILFDGTDTDALLHAREQWRGAKAAGHAIAYWQQDEGGRWTKKA

Sequences:

>Translated_150_residues
MTEILFYHLQRQPLEKVLPSLVEKSLERGWQAAIQAVSEERLQALDDGLWTYTDESFLPHGTDRDTDAASQPVVLTLRET
NPNGASIRFLVEGAELPEDAESYQRICILFDGTDTDALLHAREQWRGAKAAGHAIAYWQQDEGGRWTKKA
>Mature_149_residues
TEILFYHLQRQPLEKVLPSLVEKSLERGWQAAIQAVSEERLQALDDGLWTYTDESFLPHGTDRDTDAASQPVVLTLRETN
PNGASIRFLVEGAELPEDAESYQRICILFDGTDTDALLHAREQWRGAKAAGHAIAYWQQDEGGRWTKKA

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 16939; Mature: 16808

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILFYHLQRQPLEKVLPSLVEKSLERGWQAAIQAVSEERLQALDDGLWTYTDESFLPH
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
GTDRDTDAASQPVVLTLRETNPNGASIRFLVEGAELPEDAESYQRICILFDGTDTDALLH
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHCEEEEEECCCCHHHHHH
AREQWRGAKAAGHAIAYWQQDEGGRWTKKA
HHHHHCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TEILFYHLQRQPLEKVLPSLVEKSLERGWQAAIQAVSEERLQALDDGLWTYTDESFLPH
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
GTDRDTDAASQPVVLTLRETNPNGASIRFLVEGAELPEDAESYQRICILFDGTDTDALLH
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHCEEEEEECCCCHHHHHH
AREQWRGAKAAGHAIAYWQQDEGGRWTKKA
HHHHHCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA