| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is 218532921
Identifier: 218532921
GI number: 218532921
Start: 5394282
End: 5395634
Strand: Reverse
Name: 218532921
Synonym: Mchl_5044
Alternate gene names: NA
Gene position: 5395634-5394282 (Counterclockwise)
Preceding gene: 218532922
Following gene: 218532917
Centisome position: 93.38
GC content: 71.25
Gene sequence:
>1353_bases ATGCCCGAAGCCCACACCGCGCCCGTCCCGCCGGCAGGCCTGCTCCGGCGCGCCGCCGGTCTCCTCCGGCGCCCGCCGGC CGCGCTCGCCGCCCTGGCCGACCAGGGCGTCGTCAGCGGCTTCGGCTTCCTCAGCGGCATCGTCGCCGCCCGTCTGCTCG GCATCGCCGAGTTCGGGCATTTCGCGATGATTCTGATCGTGCTTACCTTCGCGCAGGCCCTGCACAACGCCCTCATCACC GCGCCGATGATGACGCTGGTCGGCGCCCGCAGCGGCGTCTCGAAGGCCTATGCCGCGACCATCCTCACGGGCGCCTTCCT GCTCTGCGTGCCCGGCGCGGTCTTCGTCGTGATCGCCCTCCTCATCGGCGGGATGTCGGGCGAGACGCTTGTGGCGGCCT GCGCCCTGATGCTGGCGCAGAACCTCCAGTTCACCCTGCGCCGCCTCCTGTTTGCGAAAGGTCGGGGCGTGCAGGCCCTG CTCATGGATTTCGCCCGCGCCGCGAGCTTCCCCTTCATCGCCCTGCTGATCTGGCTTGAGCACGACGTCATCGGCAGCAA TGGCTTCGTCTGGCTGCTCGCCGCGACCTCTTTCGCGACCTGCCTGCCCTTCATCGTCGCGTTCGGCCGGCCGATCCTGC GCCGGCCCGGCTGCGTGCAGACCGGCGCGGTCTTTCGGCGCCACATCCCGCTCGCGCGCTGGCTCCTGCCGATCGTCTTC GTCACCTTCGTCCAGGAGCAGCTCATCTGGCTGGTGGCGGGCGCGACGCTGGGCCTCGAGGAACTCGGCGGCCTGCGGGC GGCGCAGTACCTCGTCGGGACCGTGCTGCTGCTGCTCGCCGCCACGGAGAACGTCCTGCCGGTGGCCGCCGCGCGCGCGC ATTCCGAGGGCGGAGAGGCGGCCCTGCGCCGCTACCTCATGCGCACGGGCATCAAGCTCGGGGTGCCGATCATCGCGATC CTCGCGGTCCTCGCCATTCCGGGCGCGATGTGGCTGCGCCTGATCTTCGGGGCGGAATATGCGGCCTATGCCAACTGCCT GCACATCCTCTCGGTCAGCGTCGTGATCGTGCTGGCCCGCGACCTCACCACGAACTACTTCCGCGCCAAGCAGAACACCC GGGTGCTGTTTGCCTCGCTCTGCGTGAGCATGGTCGTGTCGCTCGCCGTAGTGGTCCCGCTGATGCAGGCCGGCGGCGTC AGCGGCGCCGCGGCGGCGGTGGGGGCAGGCCACCTCGCCTCCCTCATCTACCTCGTGCTGGCCGCACGGCGGCAATCGCG CCCGGCCTCGGCCTGGCCGATGCCGGGCCGGTGGCGGCGCTCGCTCAGGCCGGCCAAGTCGGCGCAGACCTGA
Upstream 100 bases:
>100_bases ACGTCGTGGCGTCCAACCCGCTCTGGCTGTTCAGCCGAAGCCGGGCGATGCGCCGCGCCGCGACGGCCATCCTGGCCACG CGCTGAGCAGGACATCCGCG
Downstream 100 bases:
>100_bases ACACCGTCGGAGATCGGGGCGAAACGCAGCCGGCTTGACGGTGCGAAGCGGGGAGACGGTTTCACGCGACGGCCGAGGCC GGACGGTCGGCCTTCGACAC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MPEAHTAPVPPAGLLRRAAGLLRRPPAALAALADQGVVSGFGFLSGIVAARLLGIAEFGHFAMILIVLTFAQALHNALIT APMMTLVGARSGVSKAYAATILTGAFLLCVPGAVFVVIALLIGGMSGETLVAACALMLAQNLQFTLRRLLFAKGRGVQAL LMDFARAASFPFIALLIWLEHDVIGSNGFVWLLAATSFATCLPFIVAFGRPILRRPGCVQTGAVFRRHIPLARWLLPIVF VTFVQEQLIWLVAGATLGLEELGGLRAAQYLVGTVLLLLAATENVLPVAAARAHSEGGEAALRRYLMRTGIKLGVPIIAI LAVLAIPGAMWLRLIFGAEYAAYANCLHILSVSVVIVLARDLTTNYFRAKQNTRVLFASLCVSMVVSLAVVVPLMQAGGV SGAAAAVGAGHLASLIYLVLAARRQSRPASAWPMPGRWRRSLRPAKSAQT
Sequences:
>Translated_450_residues MPEAHTAPVPPAGLLRRAAGLLRRPPAALAALADQGVVSGFGFLSGIVAARLLGIAEFGHFAMILIVLTFAQALHNALIT APMMTLVGARSGVSKAYAATILTGAFLLCVPGAVFVVIALLIGGMSGETLVAACALMLAQNLQFTLRRLLFAKGRGVQAL LMDFARAASFPFIALLIWLEHDVIGSNGFVWLLAATSFATCLPFIVAFGRPILRRPGCVQTGAVFRRHIPLARWLLPIVF VTFVQEQLIWLVAGATLGLEELGGLRAAQYLVGTVLLLLAATENVLPVAAARAHSEGGEAALRRYLMRTGIKLGVPIIAI LAVLAIPGAMWLRLIFGAEYAAYANCLHILSVSVVIVLARDLTTNYFRAKQNTRVLFASLCVSMVVSLAVVVPLMQAGGV SGAAAAVGAGHLASLIYLVLAARRQSRPASAWPMPGRWRRSLRPAKSAQT >Mature_449_residues PEAHTAPVPPAGLLRRAAGLLRRPPAALAALADQGVVSGFGFLSGIVAARLLGIAEFGHFAMILIVLTFAQALHNALITA PMMTLVGARSGVSKAYAATILTGAFLLCVPGAVFVVIALLIGGMSGETLVAACALMLAQNLQFTLRRLLFAKGRGVQALL MDFARAASFPFIALLIWLEHDVIGSNGFVWLLAATSFATCLPFIVAFGRPILRRPGCVQTGAVFRRHIPLARWLLPIVFV TFVQEQLIWLVAGATLGLEELGGLRAAQYLVGTVLLLLAATENVLPVAAARAHSEGGEAALRRYLMRTGIKLGVPIIAIL AVLAIPGAMWLRLIFGAEYAAYANCLHILSVSVVIVLARDLTTNYFRAKQNTRVLFASLCVSMVVSLAVVVPLMQAGGVS GAAAAVGAGHLASLIYLVLAARRQSRPASAWPMPGRWRRSLRPAKSAQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47560; Mature: 47428
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAHTAPVPPAGLLRRAAGLLRRPPAALAALADQGVVSGFGFLSGIVAARLLGIAEFGH CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAMILIVLTFAQALHNALITAPMMTLVGARSGVSKAYAATILTGAFLLCVPGAVFVVIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGGMSGETLVAACALMLAQNLQFTLRRLLFAKGRGVQALLMDFARAASFPFIALLIWLE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HDVIGSNGFVWLLAATSFATCLPFIVAFGRPILRRPGCVQTGAVFRRHIPLARWLLPIVF HHHCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH VTFVQEQLIWLVAGATLGLEELGGLRAAQYLVGTVLLLLAATENVLPVAAARAHSEGGEA HHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH ALRRYLMRTGIKLGVPIIAILAVLAIPGAMWLRLIFGAEYAAYANCLHILSVSVVIVLAR HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLTTNYFRAKQNTRVLFASLCVSMVVSLAVVVPLMQAGGVSGAAAAVGAGHLASLIYLVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AARRQSRPASAWPMPGRWRRSLRPAKSAQT HHHHCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure PEAHTAPVPPAGLLRRAAGLLRRPPAALAALADQGVVSGFGFLSGIVAARLLGIAEFGH CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAMILIVLTFAQALHNALITAPMMTLVGARSGVSKAYAATILTGAFLLCVPGAVFVVIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGGMSGETLVAACALMLAQNLQFTLRRLLFAKGRGVQALLMDFARAASFPFIALLIWLE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HDVIGSNGFVWLLAATSFATCLPFIVAFGRPILRRPGCVQTGAVFRRHIPLARWLLPIVF HHHCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH VTFVQEQLIWLVAGATLGLEELGGLRAAQYLVGTVLLLLAATENVLPVAAARAHSEGGEA HHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH ALRRYLMRTGIKLGVPIIAILAVLAIPGAMWLRLIFGAEYAAYANCLHILSVSVVIVLAR HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLTTNYFRAKQNTRVLFASLCVSMVVSLAVVVPLMQAGGVSGAAAAVGAGHLASLIYLVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AARRQSRPASAWPMPGRWRRSLRPAKSAQT HHHHCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA