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The map label for this gene is ybgL [C]

Identifier: 218532898

GI number: 218532898

Start: 5368132

End: 5368914

Strand: Reverse

Name: ybgL [C]

Synonym: Mchl_5021

Alternate gene names: 218532898

Gene position: 5368914-5368132 (Counterclockwise)

Preceding gene: 218532899

Following gene: 218532897

Centisome position: 92.92

GC content: 72.41

Gene sequence:

>783_bases
ATGAGCGCCGCCCGCATCGATCTCAACGCCGATCTCGGCGAGGGTTTCGGGCCCTGGCGGATGGGCAACGACGCCGCGCT
CCTCGATATCGTCACCTCGGCCAACGTCGCCTGCGGCTTCCATGCGGGCGACCCCAACATCATGGTCGAGACGGTGCTCG
CGGCGAAGGCGCGGGGCGTGGCGATCGGTGCCCATCCCGGTTTCCACGATCTGCGCGGCTTCGGCCGAAACCGGATCCAG
GAGAGTCCCACAAGAATCGAGCGCGACATCGCCTATCAGATCGGTGCGCTCCAGGCCTGCGCCGCCCTGGCCGGCGCCCG
CGTCACCCACGTCAAGGCGCACGGGGCGCTCGCCAACCTCTCGAACGAGGATGCGGCGATCGCCGAAGCGCTGGCCCGTG
CCGTGGCCGGCGTCGATCCCGATCTCGCCCTGGTCGTGATGCCGGGGCTTCCCGCCGAGCGGGCCGGCGAGCGCATCGGC
CTGCGCCTCGTGCGGGAAATCTACGCCGACCGCGCCTATGCCGAGGACGGCACGCTCGCCCCCCGCGCCTCGCCCGGCGC
GGTGATCCACGATGCGGGCGAGGCCGCCGCGCGCGTCGCCCGCATGGTCGGGGAGGGCGCCGTGTTCACACTCGGCGGGC
GGCGCGTTCCGGTCGCGATCGACACGGTCTGCGTCCACGGCGACAACCCGAAGGCGCTCGCCATGGCACGCGCGGTGCGG
GCCGAGCTTGAGCGGGCGGGCTTTAGCCTGCGCCCCTTCGCCGAACCCTCTGCGACGTCCTGA

Upstream 100 bases:

>100_bases
AGCAAGGCGCAGGGGCCGGCGGCGGAGGTGGAGCGCTACAAGCGGGTGTTCGGGGTCGAGGAGCAGGCCGCGATGGCGGT
GGCGGTGTGAGAGCAGAAGC

Downstream 100 bases:

>100_bases
GGGACGAATCCGTTACGGCGACGTTTCAGGGATCGAATTCAGGCCGCTCACGGTTTCTTGAGCTCAGGTGCCTCCGGGCG
CTGGCCCGTGCGCTGGCCCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSAARIDLNADLGEGFGPWRMGNDAALLDIVTSANVACGFHAGDPNIMVETVLAAKARGVAIGAHPGFHDLRGFGRNRIQ
ESPTRIERDIAYQIGALQACAALAGARVTHVKAHGALANLSNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERIG
LRLVREIYADRAYAEDGTLAPRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPKALAMARAVR
AELERAGFSLRPFAEPSATS

Sequences:

>Translated_260_residues
MSAARIDLNADLGEGFGPWRMGNDAALLDIVTSANVACGFHAGDPNIMVETVLAAKARGVAIGAHPGFHDLRGFGRNRIQ
ESPTRIERDIAYQIGALQACAALAGARVTHVKAHGALANLSNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERIG
LRLVREIYADRAYAEDGTLAPRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPKALAMARAVR
AELERAGFSLRPFAEPSATS
>Mature_259_residues
SAARIDLNADLGEGFGPWRMGNDAALLDIVTSANVACGFHAGDPNIMVETVLAAKARGVAIGAHPGFHDLRGFGRNRIQE
SPTRIERDIAYQIGALQACAALAGARVTHVKAHGALANLSNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERIGL
RLVREIYADRAYAEDGTLAPRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPKALAMARAVRA
ELERAGFSLRPFAEPSATS

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=46.3114754098361, Blast_Score=200, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26950; Mature: 26819

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARIDLNADLGEGFGPWRMGNDAALLDIVTSANVACGFHAGDPNIMVETVLAAKARGV
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCE
AIGAHPGFHDLRGFGRNRIQESPTRIERDIAYQIGALQACAALAGARVTHVKAHGALANL
EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC
SNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERIGLRLVREIYADRAYAEDGTLA
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPKALAMARAVR
CCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHH
AELERAGFSLRPFAEPSATS
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAARIDLNADLGEGFGPWRMGNDAALLDIVTSANVACGFHAGDPNIMVETVLAAKARGV
CCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCE
AIGAHPGFHDLRGFGRNRIQESPTRIERDIAYQIGALQACAALAGARVTHVKAHGALANL
EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCC
SNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERIGLRLVREIYADRAYAEDGTLA
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPKALAMARAVR
CCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHH
AELERAGFSLRPFAEPSATS
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA