Definition | Methylobacterium chloromethanicum CM4, complete genome. |
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Accession | NC_011757 |
Length | 5,777,908 |
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The map label for this gene is qheDH [H]
Identifier: 218532861
GI number: 218532861
Start: 5327642
End: 5329480
Strand: Reverse
Name: qheDH [H]
Synonym: Mchl_4984
Alternate gene names: 218532861
Gene position: 5329480-5327642 (Counterclockwise)
Preceding gene: 218532863
Following gene: 218532858
Centisome position: 92.24
GC content: 71.23
Gene sequence:
>1839_bases GTGACACGCCGCACGAAGACGCTTGCCGCGCGCCGGAGCACGCATCCGAATCCGGGACGTGCCGGCCTCGCCGCCCTGCT GTTCGTTGCGGCGAACCTTCTGCCGACAGTGCCTGCCTTCGCGCAGGACACCGTCCGATCGTCCGGCGACTGGCCGGCCT TCGGGCGCGATGCCAGCAACACCCATCATTCGCCGCTGGCGCAGATCGACCGCGGCAATGTCGGCCGCCTGCGCCCGGCC TGGATCTTCCAGACCGGCATCACCGGCACCTTCCAGGCCGAGCCGGTGGTGATCGAGGGCGTGATGTACGTCTCGGCCAC GGGCAACCACGTCGCGGCGCTGGAGGCGAAATCCGGCAAGACACTGTGGACCTACACCCACAAGGCGCGCACGGAGAAGA TCTTCGGCCCGCCCTCGAACCGGGGCGTGGCGGTCGCGGGCGGCCTCGTCTTCGAGGCGACCATGGACGGGCGCGTCATC GCGCTGGACGCGAAGACCGGCCGGCTGGTCTGGGACCGCGAGGCAGTGCGGCCGGAAGAGGGCGAGTCCGAGACCGCTTC GGCGCTCGCGGCGAGCCTGGGCGATAAGCCGGTCCAGGGTTCGAGCCGCCTCGGCTTCAAGATGCCGCCGCTGGTGGCCG ACGGCCTCGTCATCGTCGGGGTGACGGGGGCGGGCTACGGCCTCCATGTGGAGGACGAAAAGGGCGGGCTCGACGGCGGC GCGGTGGTCGGGATCGAGGGCGGCTACGGCCGGCGTGGCTGGCTCGCCGCCTACGACGCGAAGACCGGTGAGGAGCGCTG GCGCTGGTACGTCACCAAGGCCGACGGCTGGGAGGGCGGCTTCGTCGAGAAGACCGCGGACGGCCTCCCGCTCCACCGCG ACATCGCCGCGGAGAAGGCCGCAGCCCCTGAGCACCGGGAAGCCTGGAAGGTCGGCGGCGGCTCGCTCTGGATGACGCCG GCCTACGATGCCGAGCTCGGTCTGATCTATCTCGGCACCGGCAATCCGGCGCCGCAGAATTTCGGCCTGACGCGCCCCGG CGACAACCTCTACACGATGAGCCTCGTGGCGCTCGATGTGAAGACCGGCAGCTTGCGCTGGCACTTCCAGCAGGTGCCGC ACGAGCAGTGGGGCTACGACGTGGCGAGCCCGCCTTTCCTCCTCGACTACCCGACCGAGAAGGGCCCGGTGAAGGCGGTG GCGCAGGCGAGCAAGCTCGGCTGGATCTATGTCCACGACCGCACCGACGGGCGGCTCATCGCCAAATCCGCTCCGCTCAT CACCCACAAGAACCTGTTCGTGCCCCCGAGCCCGGAGGGCACGGTGGTCAGCCCCGGCCCCCTCGGAGCGGTGTCCTGGC ATCCGGTGGCCTACGATGCGGGCAGTGGCCTCGCCTTCGCCCAGGTGCGGCACGGCGCGGCAACCTACACGGTGAAGACC GCGCCGGCCGCGGGCGGACGCGGCGAAATCCGCTACACCGAGACGGGGGAGGCGAAGGGAGAGCCGACCTTCTCGACGCT GACCGCAGTCGATCTCGCGCAGGGCGGGGCGGTGGCGTGGTCGCGTAAGGCCGGAAGCCGATTGTCCGGCGGCACTCTCG CCACCGCGGGCGGCCTCGTCTTCTCGGGCGAGGAGGACGGCCATCTCGACGCGCACGACGCGAAGACCGGCGAGATCCTC TGGCGCTTCCAGTGCGGGGCGGGGATCGGCGGACCGCCGGTCACCTACACCGTCGAGGGCCGCCAATACGTGGCGGTCGC CGCGGGCGGCGCCTCCTTCACCAAGGGGTCGGGCTTCGGCACGGGCGACGCGCTCGTGGTGTTCGCGCTGCCCGAGTAG
Upstream 100 bases:
>100_bases GGATGTTGGGTCCGAGAAAGTCGTGCGGCCAAAGCGCTTTCGCCGTTCGACAGGATCGCCGCCCCGCCGTAACCAGGAAG CGAAGCACGGGAGAAGCAGA
Downstream 100 bases:
>100_bases TGGGCCCGCGCCTCACTCCGCCGCGTCGGGTTCCTCGTCCCCGTCATCCGGCTCGTGCGCGTCCGCCTCGTCCTCCCGCG TCTCGTCGGAGGCGGGGCGG
Product: pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MTRRTKTLAARRSTHPNPGRAGLAALLFVAANLLPTVPAFAQDTVRSSGDWPAFGRDASNTHHSPLAQIDRGNVGRLRPA WIFQTGITGTFQAEPVVIEGVMYVSATGNHVAALEAKSGKTLWTYTHKARTEKIFGPPSNRGVAVAGGLVFEATMDGRVI ALDAKTGRLVWDREAVRPEEGESETASALAASLGDKPVQGSSRLGFKMPPLVADGLVIVGVTGAGYGLHVEDEKGGLDGG AVVGIEGGYGRRGWLAAYDAKTGEERWRWYVTKADGWEGGFVEKTADGLPLHRDIAAEKAAAPEHREAWKVGGGSLWMTP AYDAELGLIYLGTGNPAPQNFGLTRPGDNLYTMSLVALDVKTGSLRWHFQQVPHEQWGYDVASPPFLLDYPTEKGPVKAV AQASKLGWIYVHDRTDGRLIAKSAPLITHKNLFVPPSPEGTVVSPGPLGAVSWHPVAYDAGSGLAFAQVRHGAATYTVKT APAAGGRGEIRYTETGEAKGEPTFSTLTAVDLAQGGAVAWSRKAGSRLSGGTLATAGGLVFSGEEDGHLDAHDAKTGEIL WRFQCGAGIGGPPVTYTVEGRQYVAVAAGGASFTKGSGFGTGDALVVFALPE
Sequences:
>Translated_612_residues MTRRTKTLAARRSTHPNPGRAGLAALLFVAANLLPTVPAFAQDTVRSSGDWPAFGRDASNTHHSPLAQIDRGNVGRLRPA WIFQTGITGTFQAEPVVIEGVMYVSATGNHVAALEAKSGKTLWTYTHKARTEKIFGPPSNRGVAVAGGLVFEATMDGRVI ALDAKTGRLVWDREAVRPEEGESETASALAASLGDKPVQGSSRLGFKMPPLVADGLVIVGVTGAGYGLHVEDEKGGLDGG AVVGIEGGYGRRGWLAAYDAKTGEERWRWYVTKADGWEGGFVEKTADGLPLHRDIAAEKAAAPEHREAWKVGGGSLWMTP AYDAELGLIYLGTGNPAPQNFGLTRPGDNLYTMSLVALDVKTGSLRWHFQQVPHEQWGYDVASPPFLLDYPTEKGPVKAV AQASKLGWIYVHDRTDGRLIAKSAPLITHKNLFVPPSPEGTVVSPGPLGAVSWHPVAYDAGSGLAFAQVRHGAATYTVKT APAAGGRGEIRYTETGEAKGEPTFSTLTAVDLAQGGAVAWSRKAGSRLSGGTLATAGGLVFSGEEDGHLDAHDAKTGEIL WRFQCGAGIGGPPVTYTVEGRQYVAVAAGGASFTKGSGFGTGDALVVFALPE >Mature_611_residues TRRTKTLAARRSTHPNPGRAGLAALLFVAANLLPTVPAFAQDTVRSSGDWPAFGRDASNTHHSPLAQIDRGNVGRLRPAW IFQTGITGTFQAEPVVIEGVMYVSATGNHVAALEAKSGKTLWTYTHKARTEKIFGPPSNRGVAVAGGLVFEATMDGRVIA LDAKTGRLVWDREAVRPEEGESETASALAASLGDKPVQGSSRLGFKMPPLVADGLVIVGVTGAGYGLHVEDEKGGLDGGA VVGIEGGYGRRGWLAAYDAKTGEERWRWYVTKADGWEGGFVEKTADGLPLHRDIAAEKAAAPEHREAWKVGGGSLWMTPA YDAELGLIYLGTGNPAPQNFGLTRPGDNLYTMSLVALDVKTGSLRWHFQQVPHEQWGYDVASPPFLLDYPTEKGPVKAVA QASKLGWIYVHDRTDGRLIAKSAPLITHKNLFVPPSPEGTVVSPGPLGAVSWHPVAYDAGSGLAFAQVRHGAATYTVKTA PAAGGRGEIRYTETGEAKGEPTFSTLTAVDLAQGGAVAWSRKAGSRLSGGTLATAGGLVFSGEEDGHLDAHDAKTGEILW RFQCGAGIGGPPVTYTVEGRQYVAVAAGGASFTKGSGFGTGDALVVFALPE
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=684, Percent_Identity=25.2923976608187, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 64338; Mature: 64207
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTKTLAARRSTHPNPGRAGLAALLFVAANLLPTVPAFAQDTVRSSGDWPAFGRDASN CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC THHSPLAQIDRGNVGRLRPAWIFQTGITGTFQAEPVVIEGVMYVSATGNHVAALEAKSGK CCCCCHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEEEECCCEEEEEECCCCC TLWTYTHKARTEKIFGPPSNRGVAVAGGLVFEATMDGRVIALDAKTGRLVWDREAVRPEE EEEEEECCCCCCEECCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEECCCCCCCCC GESETASALAASLGDKPVQGSSRLGFKMPPLVADGLVIVGVTGAGYGLHVEDEKGGLDGG CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCEEEEECCCCCCCCC AVVGIEGGYGRRGWLAAYDAKTGEERWRWYVTKADGWEGGFVEKTADGLPLHRDIAAEKA EEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH AAPEHREAWKVGGGSLWMTPAYDAELGLIYLGTGNPAPQNFGLTRPGDNLYTMSLVALDV CCCCCHHHEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEE KTGSLRWHFQQVPHEQWGYDVASPPFLLDYPTEKGPVKAVAQASKLGWIYVHDRTDGRLI ECCCEEEEHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCEEEEEEECCCCEEE AKSAPLITHKNLFVPPSPEGTVVSPGPLGAVSWHPVAYDAGSGLAFAQVRHGAATYTVKT EECCCEEEECCEECCCCCCCCEECCCCCCCEEECCEEEECCCCEEEEEECCCCEEEEEEE APAAGGRGEIRYTETGEAKGEPTFSTLTAVDLAQGGAVAWSRKAGSRLSGGTLATAGGLV CCCCCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCCEEEECCCEE FSGEEDGHLDAHDAKTGEILWRFQCGAGIGGPPVTYTVEGRQYVAVAAGGASFTKGSGFG EECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCC TGDALVVFALPE CCCEEEEEEECC >Mature Secondary Structure TRRTKTLAARRSTHPNPGRAGLAALLFVAANLLPTVPAFAQDTVRSSGDWPAFGRDASN CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC THHSPLAQIDRGNVGRLRPAWIFQTGITGTFQAEPVVIEGVMYVSATGNHVAALEAKSGK CCCCCHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEEEECCCEEEEEECCCCC TLWTYTHKARTEKIFGPPSNRGVAVAGGLVFEATMDGRVIALDAKTGRLVWDREAVRPEE EEEEEECCCCCCEECCCCCCCCEEEECCEEEEEECCCEEEEEECCCCCEEECCCCCCCCC GESETASALAASLGDKPVQGSSRLGFKMPPLVADGLVIVGVTGAGYGLHVEDEKGGLDGG CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCEEEEECCCCCCCCC AVVGIEGGYGRRGWLAAYDAKTGEERWRWYVTKADGWEGGFVEKTADGLPLHRDIAAEKA EEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH AAPEHREAWKVGGGSLWMTPAYDAELGLIYLGTGNPAPQNFGLTRPGDNLYTMSLVALDV CCCCCHHHEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEE KTGSLRWHFQQVPHEQWGYDVASPPFLLDYPTEKGPVKAVAQASKLGWIYVHDRTDGRLI ECCCEEEEHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCEEEEEEECCCCEEE AKSAPLITHKNLFVPPSPEGTVVSPGPLGAVSWHPVAYDAGSGLAFAQVRHGAATYTVKT EECCCEEEECCEECCCCCCCCEECCCCCCCEEECCEEEECCCCEEEEEECCCCEEEEEEE APAAGGRGEIRYTETGEAKGEPTFSTLTAVDLAQGGAVAWSRKAGSRLSGGTLATAGGLV CCCCCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCCEEEECCCEE FSGEEDGHLDAHDAKTGEILWRFQCGAGIGGPPVTYTVEGRQYVAVAAGGASFTKGSGFG EECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCC TGDALVVFALPE CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]