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The map label for this gene is 218532815

Identifier: 218532815

GI number: 218532815

Start: 5272094

End: 5272624

Strand: Reverse

Name: 218532815

Synonym: Mchl_4938

Alternate gene names: NA

Gene position: 5272624-5272094 (Counterclockwise)

Preceding gene: 218532816

Following gene: 218532814

Centisome position: 91.25

GC content: 66.29

Gene sequence:

>531_bases
ATGGACACCAGTGAACAGGACGCGGAGACAGCCCGCCTCGTTACCCTCACGGCCGATGTCGTGTCTGCTTATGTCAGCAA
CAATCACGTACAGAGCGCCGAGTTGCCGAAGCTTCTCGGGGAAGTGCATGAGGCGATTCGCTCGGTCAGCTTGAGCGGCC
GTCCCACCGCCGAAACCGGGCCGCCCAAGGCGACGCCACAGGAAATCCGCAAGTCGATCAGCCACGACTTTCTGGTCAGC
TTCGAGGACGGCAAGCCCTACAAGACGCTGCGCCGCCATCTCACCCTGCGCGGCCTCTCGCCGGAACAGTATCGGGCGAA
ATGGGGCCTCCCCAACGATTACCCCATGACCTCGGCGAGCTACTCGGAGCAGCGCTCCGAACTGGCGCGTGCTCTGGGCC
TGGGTCAGCAGCGCCGCCGGATCGCCGAGCCGGAAGCGGAAGTCGAGGCAGCGCCCGAGCCGGTGGCCGCCGAGCCGGAA
CCCGCTGCGGAGAAGAAGCGCCGCGCTCCGCGCCGCAAGAAGGACGCTTGA

Upstream 100 bases:

>100_bases
TTCGACCTGACTGCGCTCGAATTTATACGCGATGTCTTGCTCTAGCACGGTCCTGAGCTTACCGTATTCCAGCTAAAGCC
CCCTCATAGAAGATTGCGCC

Downstream 100 bases:

>100_bases
GCCCAAGCGCAGCTTCGCTTGAGCGCAAATCCACTTGGTCAACGCGGGCTCGGCGGTGCCGGGCCCGCGTGCCGTTCGAT
CGCCCAGCGCCCCGACGGCG

Product: MucR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDTSEQDAETARLVTLTADVVSAYVSNNHVQSAELPKLLGEVHEAIRSVSLSGRPTAETGPPKATPQEIRKSISHDFLVS
FEDGKPYKTLRRHLTLRGLSPEQYRAKWGLPNDYPMTSASYSEQRSELARALGLGQQRRRIAEPEAEVEAAPEPVAAEPE
PAAEKKRRAPRRKKDA

Sequences:

>Translated_176_residues
MDTSEQDAETARLVTLTADVVSAYVSNNHVQSAELPKLLGEVHEAIRSVSLSGRPTAETGPPKATPQEIRKSISHDFLVS
FEDGKPYKTLRRHLTLRGLSPEQYRAKWGLPNDYPMTSASYSEQRSELARALGLGQQRRRIAEPEAEVEAAPEPVAAEPE
PAAEKKRRAPRRKKDA
>Mature_176_residues
MDTSEQDAETARLVTLTADVVSAYVSNNHVQSAELPKLLGEVHEAIRSVSLSGRPTAETGPPKATPQEIRKSISHDFLVS
FEDGKPYKTLRRHLTLRGLSPEQYRAKWGLPNDYPMTSASYSEQRSELARALGLGQQRRRIAEPEAEVEAAPEPVAAEPE
PAAEKKRRAPRRKKDA

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008807 [H]

Pfam domain/function: PF05443 ROS_MUCR [H]

EC number: NA

Molecular weight: Translated: 19496; Mature: 19496

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSEQDAETARLVTLTADVVSAYVSNNHVQSAELPKLLGEVHEAIRSVSLSGRPTAETG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPKATPQEIRKSISHDFLVSFEDGKPYKTLRRHLTLRGLSPEQYRAKWGLPNDYPMTSAS
CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCH
YSEQRSELARALGLGQQRRRIAEPEAEVEAAPEPVAAEPEPAAEKKRRAPRRKKDA
HHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDTSEQDAETARLVTLTADVVSAYVSNNHVQSAELPKLLGEVHEAIRSVSLSGRPTAETG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPKATPQEIRKSISHDFLVSFEDGKPYKTLRRHLTLRGLSPEQYRAKWGLPNDYPMTSAS
CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCH
YSEQRSELARALGLGQQRRRIAEPEAEVEAAPEPVAAEPEPAAEKKRRAPRRKKDA
HHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]