| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is ahcY
Identifier: 218532774
GI number: 218532774
Start: 5212153
End: 5213559
Strand: Reverse
Name: ahcY
Synonym: Mchl_4897
Alternate gene names: 218532774
Gene position: 5213559-5212153 (Counterclockwise)
Preceding gene: 218532775
Following gene: 218532773
Centisome position: 90.23
GC content: 64.82
Gene sequence:
>1407_bases ATGGCTGTTGCCAACGATTACATCGTCAAGGACATCGGGCTGGCCGATTACGGCCGCAAGGAAATCTCGATCGCCGAGAC CGAGATGCCCGGCCTGATGTCGACCCGCGCCGAGTACGGCGCGTCGCAGCCGCTCAAGGGCGCCAAGATCGCCGGCTCGC TGCACATGACGATCCAGACGGCGGTGCTGATCGAGACCCTGAAGGCGCTCGGCGCCGACATCCGCTGGGTGTCGTGCAAC ATCTACTCGACCCAGGACCACGCCGCCGCCGCGATCGCCGCCGCCGGCATCCCGGTCTTCGCCGTGAAGGGCGAGACCCT GACCGAGTACTGGGACTACACCTCGAAGCTGTTCGACTGGCATGACGGCGGAATGCCGAACATGATCCTCGACGACGGCG GCGACGCCACCATGTTCGTTCACCTCGGCCTGCGCGCCGAGAACGGCGACACCGCCTTCCTCGACAAGCCGGAATCCGAG GAGGAGGAGGTCTTCTTCGCGCTCCTGAAGAAGAAGCTCGCCGAGAAGCCGAAGGGCTGGTTCGCGGGTCTGGCCGACTC GATCAAGGGCGTCTCCGAGGAGACCACCACGGGCGTGCACCGCCTCTACAACCTCGCCAAGGAGGGCAAGCTGCTCTTCC CGGCGATCAACGTGAACGACTCGGTCACCAAGTCGAAGTTCGACAACCTCTACGGCTGCAAGGAGTCGCTGGTCGACGGC ATCCGCCGCGGCACCGACGTCATGATGGCCGGCAAGGTCGCGATGGTCGCGGGCTTCGGCGACGTGGGCAAGGGCTCGGC CGCTTCGCTGCGCAACGCCGGTTGCCGCGTGCTCGTCTCCGAGATCGATCCGATCTGCGCCCTGCAGGCGGCGATGGAAG GCTACGAGGTCGTCACGATGGAAGACGCGGCGCCCCGCGCCGACATCTTCGTGACCGCCACGGGCAACAAGGACATCATC ACGATCGAACACATGCGGGCCATGAAGGACCGTGCGATCGTCTGCAACATCGGCCACTTCGACAACGAGATTCAGGTCGC CGGCCTGAAGAACCTCAAGTGGCAGAACATCAAGCCGCAGGTCGATGAGATCGAGTTCGCCGACGGCCACCGCATCATCC TCCTCTCGGAGGGCCGCCTGGTGAACCTCGGCAACGCGACGGGCCACCCGTCCTTCGTGATGTCGGCCTCCTTCACCAAC CAGACGCTCGCCCAGATCGAGCTCTGGACCAACCCCGGCAAGTACGAGCGTCAGGTCTACACCCTGCCCAAGGCCCTCGA TGAGAAGGTCGCGGCGCTCCACCTCGAGAAGATCGGCGTGAAGCTCTCCAAGCTCCGCCCCGATCAGGCCGCCTATATCG GCGTGTCGCAGACCGGCCCGTTCAAGCCCGAGCATTACCGCTACTAA
Upstream 100 bases:
>100_bases AGCCCTGCTACAGGGATGGCCGACCCGGCCGGGTGAACCGGCCGATGCGCCGGAACGATTGGCCGTTTCGCGCCGGCCAC GACTGAAAAGGGATACCGAG
Downstream 100 bases:
>100_bases TCGGTCGTCGGGCCTCCGGCTTCCGCGCAGGAAGTCGGAGGCCCGGTGCCGCTCCGCTCAAGATTCGCGAGGAAGCCCGG CCGATGGCCGGGCTTCTTTG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MAVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCN IYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESE EEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG IRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDII TIEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQVDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTN QTLAQIELWTNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY
Sequences:
>Translated_468_residues MAVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCN IYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESE EEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG IRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDII TIEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQVDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTN QTLAQIELWTNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY >Mature_467_residues AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNI YSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESEE EEVFFALLKKKLAEKPKGWFAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDGI RRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIIT IEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQVDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTNQ TLAQIELWTNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=464, Percent_Identity=59.4827586206897, Blast_Score=514, Evalue=1e-146, Organism=Homo sapiens, GI239937451, Length=442, Percent_Identity=59.2760180995475, Blast_Score=489, Evalue=1e-138, Organism=Homo sapiens, GI298286489, Length=468, Percent_Identity=47.8632478632479, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI195539349, Length=468, Percent_Identity=47.8632478632479, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI24308043, Length=468, Percent_Identity=47.8632478632479, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI195539337, Length=468, Percent_Identity=47.8632478632479, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI21361647, Length=468, Percent_Identity=47.4358974358974, Blast_Score=426, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17506425, Length=467, Percent_Identity=60.1713062098501, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6320882, Length=484, Percent_Identity=58.6776859504132, Blast_Score=513, Evalue=1e-146, Organism=Drosophila melanogaster, GI24642172, Length=464, Percent_Identity=61.8534482758621, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI24656245, Length=472, Percent_Identity=48.5169491525424, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI45553387, Length=465, Percent_Identity=48.6021505376344, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI45553385, Length=464, Percent_Identity=48.4913793103448, Blast_Score=422, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_METC4 (B7KSJ4)
Other databases:
- EMBL: CP001298 - RefSeq: YP_002423590.1 - ProteinModelPortal: B7KSJ4 - SMR: B7KSJ4 - GeneID: 7114318 - GenomeReviews: CP001298_GR - KEGG: mch:Mchl_4897 - HOGENOM: HBG352029 - OMA: VITHDHM - ProtClustDB: PRK05476 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 51025; Mature: 50894
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 57-57 BINDING 132-132 BINDING 194-194 BINDING 224-224 BINDING 228-228 BINDING 229-229 BINDING 281-281 BINDING 316-316 BINDING 382-382
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQT CCCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEECEEEEHHHH AVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDW HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC HDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESEEEEVFFALLKKKLAEKPKGW CCCCCCCEEEECCCCEEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCH FAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHH IRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTM HHCCCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEEE EDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQ CCCCCCCCEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC VDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNPGKYERQVY CCCEEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEE TLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY ECHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQT CCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEECEEEEHHHH AVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDW HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC HDGGMPNMILDDGGDATMFVHLGLRAENGDTAFLDKPESEEEEVFFALLKKKLAEKPKGW CCCCCCCEEEECCCCEEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCH FAGLADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHH IRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTM HHCCCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEEE EDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVAGLKNLKWQNIKPQ CCCCCCCCEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC VDEIEFADGHRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNPGKYERQVY CCCEEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEE TLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY ECHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA