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The map label for this gene is 218532675

Identifier: 218532675

GI number: 218532675

Start: 5079944

End: 5080573

Strand: Reverse

Name: 218532675

Synonym: Mchl_4790

Alternate gene names: NA

Gene position: 5080573-5079944 (Counterclockwise)

Preceding gene: 218532676

Following gene: 218532674

Centisome position: 87.93

GC content: 64.92

Gene sequence:

>630_bases
ATGCCCGAAGTTGTCACTGTTCCCACCAGCACACGTGTTGCCTGGAACCGCGGCCGTATCGTCGGCCCCAAACCGCCCCT
GAAGCCGAAGCACATCTGGGCCCTGCGCACGCGCCTCCAGCTCGCCGACCGCACGCGAGACCTCGCCCTGTTCAACCTTG
CCGTCGATAGCAAGCTACGCGGGTGTGATCTCGTCCGCCTGCGCGTGAGCGACATTCATCTGGGCAACGCTGTGCGTCTC
CGAGCGACCGTCTGCCAGCGCAAGACCGGCAGGCCGGTCCCGTTCGAGATTACCGAACCGACGCGCGAGGCTCTCACGGC
CTGGCTGACTGCGCGCAGGTTGAAAGCCGGCGACTGGCTGTTCCCGAGCCGCAGCCGACTTGGAGAGCATCTGACGACGC
GGCACTACAGCCGGCTGGTAGACCGCTGGGTCGCCCTGATCGGCCTGGACCCCTCGGCCTTCGGTTCGCAGAGCCTGCGC
CGCACCAAGGTCGCGATGGTCTATAAGCGCACCGGCAATATCCGAGCCTGCCAACTGCTGCTTGGCCACACGAAGCTGGA
AAGTACGGTTCGCTACCTCGGCATTGAGGTTGACGACGCCCTGATCCTCTCAGAGCAGACCGAGATCTGA

Upstream 100 bases:

>100_bases
CGCCAATGTCGGCTTGTGCAGCAGAGAGCCGTCATTCGACGTTCGGCTCAGCGGCAGCATCGGTTTCCTCATGACGAGCT
CCTCAACTCAGGAGCCTGTC

Downstream 100 bases:

>100_bases
ACCGGGCGCCGCGGTCGAAATGGCTGCGGCGTGCCAGTAGGATGGTCGCCCCCAGGGTGGCGAATGACCCCAAGCGGATT
TCGAGCGTGTGTCAGCCGAA

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; DNA Integration/Recombination/Inversion Protein; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Tyrosine Recombinase XerD; Recombinase; Phage Integrase/Recombinase; Transposase; Fragmented Site-Specific Recombinase XerC/XerD; Phage Integrase Protein; Truncated Site-Specific Recombinase

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPEVVTVPTSTRVAWNRGRIVGPKPPLKPKHIWALRTRLQLADRTRDLALFNLAVDSKLRGCDLVRLRVSDIHLGNAVRL
RATVCQRKTGRPVPFEITEPTREALTAWLTARRLKAGDWLFPSRSRLGEHLTTRHYSRLVDRWVALIGLDPSAFGSQSLR
RTKVAMVYKRTGNIRACQLLLGHTKLESTVRYLGIEVDDALILSEQTEI

Sequences:

>Translated_209_residues
MPEVVTVPTSTRVAWNRGRIVGPKPPLKPKHIWALRTRLQLADRTRDLALFNLAVDSKLRGCDLVRLRVSDIHLGNAVRL
RATVCQRKTGRPVPFEITEPTREALTAWLTARRLKAGDWLFPSRSRLGEHLTTRHYSRLVDRWVALIGLDPSAFGSQSLR
RTKVAMVYKRTGNIRACQLLLGHTKLESTVRYLGIEVDDALILSEQTEI
>Mature_208_residues
PEVVTVPTSTRVAWNRGRIVGPKPPLKPKHIWALRTRLQLADRTRDLALFNLAVDSKLRGCDLVRLRVSDIHLGNAVRLR
ATVCQRKTGRPVPFEITEPTREALTAWLTARRLKAGDWLFPSRSRLGEHLTTRHYSRLVDRWVALIGLDPSAFGSQSLRR
TKVAMVYKRTGNIRACQLLLGHTKLESTVRYLGIEVDDALILSEQTEI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23719; Mature: 23588

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVVTVPTSTRVAWNRGRIVGPKPPLKPKHIWALRTRLQLADRTRDLALFNLAVDSKLR
CCCEEECCCCCEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
GCDLVRLRVSDIHLGNAVRLRATVCQRKTGRPVPFEITEPTREALTAWLTARRLKAGDWL
CCEEEEEEEEEEECCCEEEEHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCC
FPSRSRLGEHLTTRHYSRLVDRWVALIGLDPSAFGSQSLRRTKVAMVYKRTGNIRACQLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHEEEEECCCCCEEEHHH
LGHTKLESTVRYLGIEVDDALILSEQTEI
HHHHHHHHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure 
PEVVTVPTSTRVAWNRGRIVGPKPPLKPKHIWALRTRLQLADRTRDLALFNLAVDSKLR
CCEEECCCCCEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
GCDLVRLRVSDIHLGNAVRLRATVCQRKTGRPVPFEITEPTREALTAWLTARRLKAGDWL
CCEEEEEEEEEEECCCEEEEHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCC
FPSRSRLGEHLTTRHYSRLVDRWVALIGLDPSAFGSQSLRRTKVAMVYKRTGNIRACQLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHEEEEECCCCCEEEHHH
LGHTKLESTVRYLGIEVDDALILSEQTEI
HHHHHHHHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA