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The map label for this gene is 218235942

Identifier: 218235942

GI number: 218235942

Start: 807511

End: 808710

Strand: Reverse

Name: 218235942

Synonym: BCB4264_A0838

Alternate gene names: NA

Gene position: 808710-807511 (Counterclockwise)

Preceding gene: 218230998

Following gene: 218235579

Centisome position: 14.92

GC content: 34.67

Gene sequence:

>1200_bases
ATGGAGCAAAACCCATCTTTGCAAGAAAATACACGCAATAAACCGAAAAAAAATAAGAAAAAAATAAAAATTATTATAAG
CGCTATACTATTCGTTTTATTAATAGGCGGCGGTTATACTTGGTTTTTAGTAAATAAAGCATCTTCTGCTGTTCGAAATG
CCGCACACGATTTAGCACGCGGTGATAAATCTGATTTACGTGATAAGGCTGTAAAACCTATTACAAACAATGTCTCTGTT
TTAATAATGGGTGTTGATGAAAGCGATGTCCGTGGAAAAGAATATGGTGAAGCTATAAGAACAGACGCGCTTTTACTTGC
AACATTTAATAAAGATAGCAAAACTGTTAAACTATTAAGTATCCCACGTGACACATATACTTATATTCCAATAGAAAAGA
AAAAAGATAAAATTACACACGCTCATGCATTCGGTTCTGCTAAAAACGGAAAAAATGGTGGACCACAAGCAAGCATTGAT
GCAGTTGAAAAATTAATGAATGTTCCTGTCGATTATTTTGTAAAATTCAACTTTAAATCATTTATAAAAATCGTCGATGA
CTTGGGCGGTGTTGAAGTTGATGTACCAGTTGAATTTACTGAGCAAGATAGCAATGATAATGCTGAGGCTATTCACCTAG
AAAAAGGTGTTCAAAAGCTAAATGGCGAAGAAGCTCTTGCTCTTGCTAGAACAAGACACATCGATAGTGATGCAATGCGT
GGACAACGTCAACAACTCGTTATCGAGGCTATTTTAAAGAAACTAACAAGTGTTGGTTCTGTAACAAAAGTTGGCAACAT
CATTGATGATATTAACGGCCAATTCGTTACAAACTTAACATTTGATGATATGCTTTCATTCTATAAATATGGATCGGATT
CGGAAATTGAGAAATTACAAATCCAAGGTGATGATTGCTATATGGCAAAAGGTGACGATACTTGTAGCAAATCTGCTGGT
GGTGGTCGAACTTACTACTACAATCCAGATAAAAAAGAATTAGCTAATGTTACAAATGAACTTCGTACTCATCTTGGACT
ACCTGCATATACAAAGTTTGACTCAGACTCTGATTCGAAAAAGACAAAAGAATCTAAGTCTGAAAATTCAAGTGAACGCG
AATCAAGTAACAATGAAGTGAAAAATAAGAACAAAAATAGCAGTGAAGATACAGAAACATCGTCTAACGACAATGAATAG

Upstream 100 bases:

>100_bases
TACGAAATGTAAATGTTTTGTAATGTTTTTTTTCGCTAAATTTCATTATAATAAGTGGATATGAGTGTCGTATTTCAATC
CAAATGAAGGAGTACAGGAA

Downstream 100 bases:

>100_bases
TAAAGAAGCCGTACTCTATGGAGGTAGAGTACGGCTTCTTTTTATTTCTTCAGAATTAAAAATCAGAACTTTCTAACTAT
CTTTTTTAATATTTTTAAAT

Product: transcription antiterminator, LytR family

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MEQNPSLQENTRNKPKKNKKKIKIIISAILFVLLIGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LIMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPIEKKKDKITHAHAFGSAKNGKNGGPQASID
AVEKLMNVPVDYFVKFNFKSFIKIVDDLGGVEVDVPVEFTEQDSNDNAEAIHLEKGVQKLNGEEALALARTRHIDSDAMR
GQRQQLVIEAILKKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGSDSEIEKLQIQGDDCYMAKGDDTCSKSAG
GGRTYYYNPDKKELANVTNELRTHLGLPAYTKFDSDSDSKKTKESKSENSSERESSNNEVKNKNKNSSEDTETSSNDNE

Sequences:

>Translated_399_residues
MEQNPSLQENTRNKPKKNKKKIKIIISAILFVLLIGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LIMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPIEKKKDKITHAHAFGSAKNGKNGGPQASID
AVEKLMNVPVDYFVKFNFKSFIKIVDDLGGVEVDVPVEFTEQDSNDNAEAIHLEKGVQKLNGEEALALARTRHIDSDAMR
GQRQQLVIEAILKKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGSDSEIEKLQIQGDDCYMAKGDDTCSKSAG
GGRTYYYNPDKKELANVTNELRTHLGLPAYTKFDSDSDSKKTKESKSENSSERESSNNEVKNKNKNSSEDTETSSNDNE
>Mature_399_residues
MEQNPSLQENTRNKPKKNKKKIKIIISAILFVLLIGGGYTWFLVNKASSAVRNAAHDLARGDKSDLRDKAVKPITNNVSV
LIMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLSIPRDTYTYIPIEKKKDKITHAHAFGSAKNGKNGGPQASID
AVEKLMNVPVDYFVKFNFKSFIKIVDDLGGVEVDVPVEFTEQDSNDNAEAIHLEKGVQKLNGEEALALARTRHIDSDAMR
GQRQQLVIEAILKKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGSDSEIEKLQIQGDDCYMAKGDDTCSKSAG
GGRTYYYNPDKKELANVTNELRTHLGLPAYTKFDSDSDSKKTKESKSENSSERESSNNEVKNKNKNSSEDTETSSNDNE

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 44227; Mature: 44227

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNPSLQENTRNKPKKNKKKIKIIISAILFVLLIGGGYTWFLVNKASSAVRNAAHDLAR
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHC
GDKSDLRDKAVKPITNNVSVLIMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLS
CCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEE
IPRDTYTYIPIEKKKDKITHAHAFGSAKNGKNGGPQASIDAVEKLMNVPVDYFVKFNFKS
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEECHHH
FIKIVDDLGGVEVDVPVEFTEQDSNDNAEAIHLEKGVQKLNGEEALALARTRHIDSDAMR
HHHHHHHCCCEEEEECEEECCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCHHHHC
GQRQQLVIEAILKKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGSDSEIEKLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEE
IQGDDCYMAKGDDTCSKSAGGGRTYYYNPDKKELANVTNELRTHLGLPAYTKFDSDSDSK
ECCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
KTKESKSENSSERESSNNEVKNKNKNSSEDTETSSNDNE
HHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQNPSLQENTRNKPKKNKKKIKIIISAILFVLLIGGGYTWFLVNKASSAVRNAAHDLAR
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHC
GDKSDLRDKAVKPITNNVSVLIMGVDESDVRGKEYGEAIRTDALLLATFNKDSKTVKLLS
CCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEE
IPRDTYTYIPIEKKKDKITHAHAFGSAKNGKNGGPQASIDAVEKLMNVPVDYFVKFNFKS
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEECHHH
FIKIVDDLGGVEVDVPVEFTEQDSNDNAEAIHLEKGVQKLNGEEALALARTRHIDSDAMR
HHHHHHHCCCEEEEECEEECCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCHHHHC
GQRQQLVIEAILKKLTSVGSVTKVGNIIDDINGQFVTNLTFDDMLSFYKYGSDSEIEKLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEE
IQGDDCYMAKGDDTCSKSAGGGRTYYYNPDKKELANVTNELRTHLGLPAYTKFDSDSDSK
ECCCEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
KTKESKSENSSERESSNNEVKNKNKNSSEDTETSSNDNE
HHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]