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The map label for this gene is plpC [H]

Identifier: 218235569

GI number: 218235569

Start: 173409

End: 174221

Strand: Reverse

Name: plpC [H]

Synonym: BCB4264_A0199

Alternate gene names: 218235569

Gene position: 174221-173409 (Counterclockwise)

Preceding gene: 218232039

Following gene: 218233673

Centisome position: 3.21

GC content: 33.21

Gene sequence:

>813_bases
ATGAAAAAGGTATTATTAAGCATTGTAAGCGGAGCAGTATTATTATTAGGCGCATGTAGTGTGAGTTCAAATAAAGAGGT
AAAAGAATTAGACGAGAAAAAGATTACTGTCGGTGTAACAGGTGGACCACATGAACAAATTTTTGAAAAGGTAAAAGAAG
TTGCAGCAAAAGATGGTCTCGAAATTGATATAAAAGTATTTAATGATTATGTAGCGCCAAACGTATCATTAGATGAAAAA
AGCCTTGATGTAAATAGCTACCAAACGAAATCGTATTTAGATGTATTTAAAGCTGAACGCAATATGAAATTAGCTGAAGT
ATTTTCAACAGTAACATTCCCTATGGGTGTATATTCTAAAGATATAAAAGATGTAAAAGACTTAAAAGAGGGCGATGCAA
TTGCTGTACCAAATGACCCAACCAATGAACTTCGAGCTTTAAAATTATTTGAAAAAGCAGGGGTTTTAAAAGTTGATCCA
AAGGCTACAGAAAAAGCGACTGCAAAAGATGTAATTGAAAATCCAAAAAAATTAAAGATTGTCGAATTAGAGGCATCTCA
ATTACCAACGCAACTAAGTGAAGTGAAAGCAGCTGCAATTAACACAAACTTTGCATTAGGTGCAAAATTAAGTCCAGCGA
AAGATTCTATTTTCCGCGAAGGAAAAGATTCACCCTATGTGAACTGGGTTGTTGTTCGTACTGAAAATAAAGATGATGCC
GTTGTAAATAAATTAAAGAAAGCTTATCAATCTAAAGAAGTAAAAGAGTTTATCGAGAAAAAATTTGATGGTTCAGTTTT
ACCATCTTGGTAG

Upstream 100 bases:

>100_bases
TTGGAAGATAAGAGAGGAATCTATTTCGTCTATTCGGCACCTCTCTTATTTTTTGGGAGGTGCTTTTTATTTTGGAACGT
ATATGAAGGGGGATTTATAG

Downstream 100 bases:

>100_bases
GAGCTGACGATAATGATTGAATTAAAAAACATATCTAAAGTATTTACAACAAAAAAAGGGAATGTTGAGGCTCTTAAGTC
TACTTCCCTTAAAGTAGAAA

Product: putative ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKKVLLSIVSGAVLLLGACSVSSNKEVKELDEKKITVGVTGGPHEQIFEKVKEVAAKDGLEIDIKVFNDYVAPNVSLDEK
SLDVNSYQTKSYLDVFKAERNMKLAEVFSTVTFPMGVYSKDIKDVKDLKEGDAIAVPNDPTNELRALKLFEKAGVLKVDP
KATEKATAKDVIENPKKLKIVELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDA
VVNKLKKAYQSKEVKEFIEKKFDGSVLPSW

Sequences:

>Translated_270_residues
MKKVLLSIVSGAVLLLGACSVSSNKEVKELDEKKITVGVTGGPHEQIFEKVKEVAAKDGLEIDIKVFNDYVAPNVSLDEK
SLDVNSYQTKSYLDVFKAERNMKLAEVFSTVTFPMGVYSKDIKDVKDLKEGDAIAVPNDPTNELRALKLFEKAGVLKVDP
KATEKATAKDVIENPKKLKIVELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDA
VVNKLKKAYQSKEVKEFIEKKFDGSVLPSW
>Mature_270_residues
MKKVLLSIVSGAVLLLGACSVSSNKEVKELDEKKITVGVTGGPHEQIFEKVKEVAAKDGLEIDIKVFNDYVAPNVSLDEK
SLDVNSYQTKSYLDVFKAERNMKLAEVFSTVTFPMGVYSKDIKDVKDLKEGDAIAVPNDPTNELRALKLFEKAGVLKVDP
KATEKATAKDVIENPKKLKIVELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDA
VVNKLKKAYQSKEVKEFIEKKFDGSVLPSW

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=259, Percent_Identity=44.015444015444, Blast_Score=200, Evalue=6e-53,
Organism=Escherichia coli, GI1790093, Length=255, Percent_Identity=38.8235294117647, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29780; Mature: 29780

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLSIVSGAVLLLGACSVSSNKEVKELDEKKITVGVTGGPHEQIFEKVKEVAAKDGL
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKSYLDVFKAERNMKLAEVFSTVTFPMGVYSK
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
DIKDVKDLKEGDAIAVPNDPTNELRALKLFEKAGVLKVDPKATEKATAKDVIENPKKLKI
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEE
VELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDA
EEECHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCHH
VVNKLKKAYQSKEVKEFIEKKFDGSVLPSW
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKVLLSIVSGAVLLLGACSVSSNKEVKELDEKKITVGVTGGPHEQIFEKVKEVAAKDGL
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
EIDIKVFNDYVAPNVSLDEKSLDVNSYQTKSYLDVFKAERNMKLAEVFSTVTFPMGVYSK
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
DIKDVKDLKEGDAIAVPNDPTNELRALKLFEKAGVLKVDPKATEKATAKDVIENPKKLKI
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEE
VELEASQLPTQLSEVKAAAINTNFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDA
EEECHHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCHH
VVNKLKKAYQSKEVKEFIEKKFDGSVLPSW
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]