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The map label for this gene is ydiF [H]

Identifier: 218234770

GI number: 218234770

Start: 252992

End: 254971

Strand: Reverse

Name: ydiF [H]

Synonym: BCB4264_A0293

Alternate gene names: 218234770

Gene position: 254971-252992 (Counterclockwise)

Preceding gene: 218234206

Following gene: 218234934

Centisome position: 4.71

GC content: 35.66

Gene sequence:

>1980_bases
ATGATTGAGAAATATAAACATGGCAAAGTTAAGAAATTATTTGAGGTGAAAACATTGATTTTATTACAAGTAAACGCGCT
TTCGAAATTATACGGTGCAGAAACAATTCTTGCAAACATAAAATTGGAAGTACAAACAAAAGATCGTATCGCATTAGTTG
GAAGGAATGGAGCAGGTAAATCTACATTATTAAAAATTATCGCTGGTGAATTATCTCATGATGGTGGCGAAATTATAAAA
CCGAAAGATGTCTCAATCGGATATTTAGCTCAAAATACCGGACTAGAAACGTCTTTAACAATTTGGGATGAAATGCTAAC
CGTCTTTACCCATTTACAGCAAATGGAGACAAAACTCCGAAGGCTTGAGCAAGAAATGGGAAAAGAAGAAAACTTTTCAA
ACGAAGCTACATATGAAAGATTGTTAGCTGATTATGACCAATTACAACTCAATTATAAAGATCAAGGTGGATATCAATAT
GAAGCGGATATTCGCTCCATTTTAAGCGGCCTTGGCTTCCCAGTTGAAACGCACCAGACGACGATCTCTACTTTAAGCGG
CGGGCAAAAAACAAGATTAGCTCTCGGGAAATTATTATTAACAAAACCAGACTTACTTATTTTGGACGAGCCTACAAACC
ATTTAGACATCGAAACATTAACATGGCTTGAGCAATATTTGCAAGGTTATCCTGGCGCAATATTAATCGTCTCACATGAC
CGTTATTTCTTAGACAAACTCGTTACACAAGTATATGAAATTTCGAATAAAGAAAGCAGACGATTTGTTGGTAACTACAG
TAAATATTTAGACTTAAAATCAGCATTATATGAGCAAGAAATGAAACGTTACGAAAAACAACAAGATGAAATCGCAAAAC
TTGAGGACTTCGTTCAAAAGAATATAGCTCGCGCTTCTACAACGAAACGTGCTCAAAGTCGCCGTAAACAACTAGACAGA
ATGGAATTATTAACGAGACCATTAGGGGATTCTAAGTCAGCATCATTCCACTTCGATATTGAAAAACAAAGTGGAAATGA
TGTTTTACAAGTAAATGATGCAACCATCGGCTATGATGAAAACCCTATAATTGAACATGTAACTATGCGCTTAACTCGCG
GAGATAGTGTTGCTTTAGTTGGTCCAAACGGAATTGGGAAATCCACATTGTTAAAATCCATTGTGAATAAGTTACCACTA
TTAAATGGTGATGTTTCTTTCGGATCAAATGTATCTGTTGGTTATTATGATCAAGAACAAGCAAACTTAACATCTTCTAA
ACGGGTTTTAAATGAACTATGGGATGAATATCCACTGCAACCGGAAAAAGAAATCCGTACTATACTTGGGAATTTTTTAT
TCACAGGAGATGATGTACTGAAACCAGTATCTTCCCTTAGTGGTGGACAAAAAGCTCGATTAGCTCTTGCAAAACTTATG
ATGCAAAAGTCAAATTTGTTAATTCTAGATGAGCCTACGAACCACCTTGATTTAAATAGTAAAGAGATTTTGGAGAATGC
TTTAATTGATTACCCAGGGACTCTTCTATTCGTCTCACATGACCGCTACTTTATTAACCGTGTAACAACGACTGTGGTTG
AGTTATCAACAGAAGGTGCACAGGAATATTTAGGGGATTACGATTACTACGTTGAAAAGAAAAATGAAATGATTGAACGT
GCAGAACTTGAACAGCAAGAAAGTGACGTTCCTGTTCAAAAGGTGGTTGCACAAGAGAAATTAAATTATTTAGAAGAAAA
AGAGCGTAAACAACTAGAGCGTCAACGCACTAGAAAAATTGAAGAGCTAGAACAAAGTATAGTGGAATTAGAAGAAGAAA
TTGCTACGTTAGAAGATCAACTTTGCTTACCAGAAATATATGCAGATTATGAAAAAGCTAGTGAAATTACAACTAAAAAG
CAAACGCTACAAGAACAACTTGAAACTTGTATGGCAGAATGGGAAGAGCTGCATGTATAA

Upstream 100 bases:

>100_bases
TACTTTAATCAAATACAGAAGTTTAGCACTCATTAAATTCCTTGTATAATAAAGAGAAGAAGTATTCTCTCTTTATTTTA
AACTATACACTATTTTTAGT

Downstream 100 bases:

>100_bases
GCATATTTAAATAAGGAAGATGTCTCATAAGTCAGGATTTTTGACTATGTGACATCTTTTTTTAGTACTTAAACAATTTT
TTGAATATATCTATCGTAAC

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MIEKYKHGKVKKLFEVKTLILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIK
PKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLNYKDQGGYQY
EADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHD
RYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDR
MELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYDENPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPL
LNGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLM
MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGAQEYLGDYDYYVEKKNEMIER
AELEQQESDVPVQKVVAQEKLNYLEEKERKQLERQRTRKIEELEQSIVELEEEIATLEDQLCLPEIYADYEKASEITTKK
QTLQEQLETCMAEWEELHV

Sequences:

>Translated_659_residues
MIEKYKHGKVKKLFEVKTLILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIK
PKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLNYKDQGGYQY
EADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHD
RYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDR
MELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYDENPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPL
LNGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLM
MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGAQEYLGDYDYYVEKKNEMIER
AELEQQESDVPVQKVVAQEKLNYLEEKERKQLERQRTRKIEELEQSIVELEEEIATLEDQLCLPEIYADYEKASEITTKK
QTLQEQLETCMAEWEELHV
>Mature_659_residues
MIEKYKHGKVKKLFEVKTLILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIK
PKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLNYKDQGGYQY
EADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHD
RYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDR
MELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYDENPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPL
LNGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLM
MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGAQEYLGDYDYYVEKKNEMIER
AELEQQESDVPVQKVVAQEKLNYLEEKERKQLERQRTRKIEELEQSIVELEEEIATLEDQLCLPEIYADYEKASEITTKK
QTLQEQLETCMAEWEELHV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=31.4500941619586, Blast_Score=249, Evalue=8e-66,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=31.9626168224299, Blast_Score=249, Evalue=8e-66,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=32.0297951582868, Blast_Score=249, Evalue=9e-66,
Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=30.8394160583942, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=30.8394160583942, Blast_Score=209, Evalue=6e-54,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=35.0378787878788, Blast_Score=332, Evalue=4e-92,
Organism=Escherichia coli, GI1789751, Length=631, Percent_Identity=30.5863708399366, Blast_Score=316, Evalue=2e-87,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=32.9608938547486, Blast_Score=281, Evalue=1e-76,
Organism=Escherichia coli, GI1787182, Length=637, Percent_Identity=30.6122448979592, Blast_Score=268, Evalue=8e-73,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=235, Percent_Identity=26.3829787234043, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=26.8722466960352, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786803, Length=166, Percent_Identity=29.5180722891566, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=546, Percent_Identity=29.6703296703297, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17553372, Length=506, Percent_Identity=31.8181818181818, Blast_Score=227, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=30.4347826086957, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71996809, Length=174, Percent_Identity=32.183908045977, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=174, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=174, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17567243, Length=227, Percent_Identity=25.1101321585903, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=33.086876155268, Blast_Score=256, Evalue=7e-69,
Organism=Saccharomyces cerevisiae, GI6321121, Length=520, Percent_Identity=32.8846153846154, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=28.2828282828283, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=27.4111675126904, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=392, Percent_Identity=25, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6324985, Length=275, Percent_Identity=26.1818181818182, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=32.9545454545455, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24642252, Length=543, Percent_Identity=31.4917127071823, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI18859989, Length=543, Percent_Identity=31.4917127071823, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24641342, Length=530, Percent_Identity=31.5094339622642, Blast_Score=236, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24649703, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281361582, Length=302, Percent_Identity=24.5033112582781, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574259, Length=183, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281363262, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653245, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 75288; Mature: 75288

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKYKHGKVKKLFEVKTLILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCCH
STLLKIIAGELSHDGGEIIKPKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLR
HHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLEQEMGKEENFSNEATYERLLADYDQLQLNYKDQGGYQYEADIRSILSGLGFPVETHQT
HHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHCCCCCCCHHH
TISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHD
HHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECC
RYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCEECCCC
NPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLNGDVSFGSNVSVGYYDQEQ
CCHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHH
ANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLM
HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH
MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGA
HHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCHHH
QEYLGDYDYYVEKKNEMIERAELEQQESDVPVQKVVAQEKLNYLEEKERKQLERQRTRKI
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELEQSIVELEEEIATLEDQLCLPEIYADYEKASEITTKKQTLQEQLETCMAEWEELHV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKYKHGKVKKLFEVKTLILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCCH
STLLKIIAGELSHDGGEIIKPKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLR
HHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLEQEMGKEENFSNEATYERLLADYDQLQLNYKDQGGYQYEADIRSILSGLGFPVETHQT
HHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHCCCCCCCHHH
TISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHD
HHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECC
RYFLDKLVTQVYEISNKESRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCEECCCC
NPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLNGDVSFGSNVSVGYYDQEQ
CCHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHH
ANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLM
HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH
MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGA
HHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCHHH
QEYLGDYDYYVEKKNEMIERAELEQQESDVPVQKVVAQEKLNYLEEKERKQLERQRTRKI
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELEQSIVELEEEIATLEDQLCLPEIYADYEKASEITTKKQTLQEQLETCMAEWEELHV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]