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The map label for this gene is ydiL [H]

Identifier: 218233651

GI number: 218233651

Start: 255952

End: 256701

Strand: Reverse

Name: ydiL [H]

Synonym: BCB4264_A0296

Alternate gene names: 218233651

Gene position: 256701-255952 (Counterclockwise)

Preceding gene: 218232498

Following gene: 218234206

Centisome position: 4.74

GC content: 36.67

Gene sequence:

>750_bases
TTGAAGAAACAATACTGGTGGATTATCGTTACATACATTTTAATGCAGTTATCTGGCGTTGTTGGATTGCCACTTCTCCT
AAAAACAGGACTCTATGATAATAGAGGATTTACCATTGAGGAAAAAGGACAAATCATAACGGGACACTGGGCAATTATTA
GCTTCTTTGTTGCATTATGTATCGTACTTTGGTTACTTAGAACAGATATTCGTAACAGGCATTTAGATCCAAAGCGCTCT
TCTGCTCCAGCTACTATTGGATGGATTTTCATCGGGTTCTTCTTAGCAATCATCTCACAATCCATTGCAGGTATGATTGA
AATGTATGTATTTGGGGTTCCACGTGGATCTGAGAATACAGACAGACTGATGGACATCGCAAGAACGATACCTTGGTTCC
TTATTGTTGTATCTATAATTGGACCTATCTTAGAAGAAATCGTATTTAGAAAAATTCTATTCGGCACGCTTTATAAGAAG
TTTAACTTCTTTATTGCAGCTATCATTAGTTCGCTTGTATTCGCAGCAATTCATTTTGATTTTACTCACTTATTGGTATA
CACTGCTATGGGGCTCGTATTCGCCTTCTTATATGTGAAGACGAAACGTATTATCGTTCCGATTGCAGCTCATGTTGCGA
TGAATACATTAGTCGCTATTGGGCAAATTTTTATGAGCAATGAACAAATTCAAGAAATGATTAAAGAAGCTGAAAAAATG
CAAGGCTTTATCGGAGGATTTTTTGTATGA

Upstream 100 bases:

>100_bases
AAAAAACATAATTCAAGTGAGGTTTATATCGTAGGTAGCATATTTACATGTTATCCTAACTTATCTCATACACTATAGTT
AGAAAGGATGGTTAAACCAT

Downstream 100 bases:

>100_bases
GAAACTCACCATTGTTCATGGCTGCACTATACTTCCTTCTTGGATGTATCTTTACACGCTTTGCCATTACGAACGTGACA
GATACAATCTGGAATATGTG

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKKQYWWIIVTYILMQLSGVVGLPLLLKTGLYDNRGFTIEEKGQIITGHWAIISFFVALCIVLWLLRTDIRNRHLDPKRS
SAPATIGWIFIGFFLAIISQSIAGMIEMYVFGVPRGSENTDRLMDIARTIPWFLIVVSIIGPILEEIVFRKILFGTLYKK
FNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIGQIFMSNEQIQEMIKEAEKM
QGFIGGFFV

Sequences:

>Translated_249_residues
MKKQYWWIIVTYILMQLSGVVGLPLLLKTGLYDNRGFTIEEKGQIITGHWAIISFFVALCIVLWLLRTDIRNRHLDPKRS
SAPATIGWIFIGFFLAIISQSIAGMIEMYVFGVPRGSENTDRLMDIARTIPWFLIVVSIIGPILEEIVFRKILFGTLYKK
FNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIGQIFMSNEQIQEMIKEAEKM
QGFIGGFFV
>Mature_249_residues
MKKQYWWIIVTYILMQLSGVVGLPLLLKTGLYDNRGFTIEEKGQIITGHWAIISFFVALCIVLWLLRTDIRNRHLDPKRS
SAPATIGWIFIGFFLAIISQSIAGMIEMYVFGVPRGSENTDRLMDIARTIPWFLIVVSIIGPILEEIVFRKILFGTLYKK
FNFFIAAIISSLVFAAIHFDFTHLLVYTAMGLVFAFLYVKTKRIIVPIAAHVAMNTLVAIGQIFMSNEQIQEMIKEAEKM
QGFIGGFFV

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 28353; Mature: 28353

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCC
>Mature Secondary Structure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HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]